Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC33.06■■■□□ 2.88
SCAF1Q9H7N4 SF1-220ENST00000626028 704 ntTSL 2 BASIC33.06■■■□□ 2.88
SCAF1Q9H7N4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
SCAF1Q9H7N4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC33.06■■■□□ 2.88
SCAF1Q9H7N4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SCAF1Q9H7N4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC33.06■■■□□ 2.88
SCAF1Q9H7N4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SCAF1Q9H7N4 ABHD17AP1-201ENST00000358206 933 ntBASIC33.05■■■□□ 2.88
SCAF1Q9H7N4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SCAF1Q9H7N4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SCAF1Q9H7N4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SCAF1Q9H7N4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SCAF1Q9H7N4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SCAF1Q9H7N4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC33.04■■■□□ 2.88
SCAF1Q9H7N4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC33.04■■■□□ 2.88
SCAF1Q9H7N4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC33.04■■■□□ 2.88
SCAF1Q9H7N4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
SCAF1Q9H7N4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
SCAF1Q9H7N4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SCAF1Q9H7N4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SCAF1Q9H7N4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC33.03■■■□□ 2.88
SCAF1Q9H7N4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC33.03■■■□□ 2.88
SCAF1Q9H7N4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
SCAF1Q9H7N4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SCAF1Q9H7N4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
SCAF1Q9H7N4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC33.03■■■□□ 2.88
SCAF1Q9H7N4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 AC142472.1-201ENST00000612013 1741 ntBASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC33.02■■■□□ 2.88
SCAF1Q9H7N4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC33.01■■■□□ 2.88
SCAF1Q9H7N4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC33.01■■■□□ 2.87
SCAF1Q9H7N4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC33.01■■■□□ 2.87
SCAF1Q9H7N4 AC099791.1-201ENST00000416440 715 ntBASIC33.01■■■□□ 2.87
SCAF1Q9H7N4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC33.01■■■□□ 2.87
SCAF1Q9H7N4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC33■■■□□ 2.87
SCAF1Q9H7N4 EP400NL-214ENST00000641289 2402 ntBASIC33■■■□□ 2.87
SCAF1Q9H7N4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC33■■■□□ 2.87
SCAF1Q9H7N4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC33■■■□□ 2.87
SCAF1Q9H7N4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
SCAF1Q9H7N4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
SCAF1Q9H7N4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
SCAF1Q9H7N4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SCAF1Q9H7N4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
SCAF1Q9H7N4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC32.99■■■□□ 2.87
SCAF1Q9H7N4 MIR6722-201ENST00000617286 78 ntBASIC32.99■■■□□ 2.87
SCAF1Q9H7N4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
SCAF1Q9H7N4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
SCAF1Q9H7N4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
SCAF1Q9H7N4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC32.98■■■□□ 2.87
SCAF1Q9H7N4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC32.98■■■□□ 2.87
SCAF1Q9H7N4 SNX5-217ENST00000606557 1087 ntBASIC32.98■■■□□ 2.87
SCAF1Q9H7N4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
SCAF1Q9H7N4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.97■■■□□ 2.87
SCAF1Q9H7N4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
SCAF1Q9H7N4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC32.97■■■□□ 2.87
SCAF1Q9H7N4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC32.97■■■□□ 2.87
SCAF1Q9H7N4 AL031602.1-201ENST00000633169 911 ntBASIC32.97■■■□□ 2.87
SCAF1Q9H7N4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC32.97■■■□□ 2.87
SCAF1Q9H7N4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 C1orf229-201ENST00000623686 2258 ntBASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 AK1-201ENST00000223836 736 ntTSL 3 BASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 LINC01124-201ENST00000409786 2117 ntBASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.96■■■□□ 2.87
SCAF1Q9H7N4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
SCAF1Q9H7N4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
SCAF1Q9H7N4 AL117328.2-201ENST00000624617 1940 ntBASIC32.95■■■□□ 2.87
SCAF1Q9H7N4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC32.95■■■□□ 2.87
SCAF1Q9H7N4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
SCAF1Q9H7N4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
SCAF1Q9H7N4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SCAF1Q9H7N4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SCAF1Q9H7N4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC32.94■■■□□ 2.86
SCAF1Q9H7N4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC32.94■■■□□ 2.86
SCAF1Q9H7N4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC32.94■■■□□ 2.86
SCAF1Q9H7N4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
SCAF1Q9H7N4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SCAF1Q9H7N4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SCAF1Q9H7N4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC32.93■■■□□ 2.86
SCAF1Q9H7N4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC32.93■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms