Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TUBB1Q9H4B7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
TUBB1Q9H4B7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TUBB1Q9H4B7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TUBB1Q9H4B7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.64■■□□□ 1.06
TUBB1Q9H4B7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
TUBB1Q9H4B7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TUBB1Q9H4B7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TUBB1Q9H4B7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.64■■□□□ 1.05
TUBB1Q9H4B7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.64■■□□□ 1.05
TUBB1Q9H4B7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TUBB1Q9H4B7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TUBB1Q9H4B7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.63■■□□□ 1.05
TUBB1Q9H4B7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TUBB1Q9H4B7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TUBB1Q9H4B7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 AL033527.3-201ENST00000566366 1196 ntBASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 SNX5-217ENST00000606557 1087 ntBASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 AC012354.3-201ENST00000623734 483 ntBASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TUBB1Q9H4B7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TUBB1Q9H4B7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 ESRRAP2-201ENST00000418437 1549 ntBASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 AC103724.3-201ENST00000564481 992 ntBASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TUBB1Q9H4B7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TUBB1Q9H4B7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 AC242852.2-201ENST00000615738 1807 ntBASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.58■■□□□ 1.05
TUBB1Q9H4B7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TUBB1Q9H4B7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
TUBB1Q9H4B7 AC127496.7-201ENST00000625110 1798 ntBASIC21.58■■□□□ 1.04
TUBB1Q9H4B7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TUBB1Q9H4B7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TUBB1Q9H4B7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 KRT8P33-201ENST00000508125 1423 ntBASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.57■■□□□ 1.04
TUBB1Q9H4B7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms