Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.74■□□□□ 0.91
UBQLN3Q9H347 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN3Q9H347 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UBQLN3Q9H347 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.73■□□□□ 0.91
UBQLN3Q9H347 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN3Q9H347 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN3Q9H347 AL136116.3-201ENST00000402907 1138 ntBASIC20.73■□□□□ 0.91
UBQLN3Q9H347 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.73■□□□□ 0.91
UBQLN3Q9H347 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN3Q9H347 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN3Q9H347 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
UBQLN3Q9H347 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 ANOS2P-203ENST00000472227 1816 ntBASIC20.71■□□□□ 0.91
UBQLN3Q9H347 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.71■□□□□ 0.91
UBQLN3Q9H347 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.7■□□□□ 0.9
UBQLN3Q9H347 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.69■□□□□ 0.9
UBQLN3Q9H347 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN3Q9H347 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN3Q9H347 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN3Q9H347 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN3Q9H347 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN3Q9H347 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
UBQLN3Q9H347 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
UBQLN3Q9H347 AC079834.2-201ENST00000609776 1949 ntBASIC20.68■□□□□ 0.9
UBQLN3Q9H347 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 ALDH1A3-203ENST00000557963 1670 ntBASIC20.68■□□□□ 0.9
UBQLN3Q9H347 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN3Q9H347 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN3Q9H347 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN3Q9H347 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN3Q9H347 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.65■□□□□ 0.9
UBQLN3Q9H347 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.65■□□□□ 0.9
UBQLN3Q9H347 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.65■□□□□ 0.9
UBQLN3Q9H347 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN3Q9H347 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN3Q9H347 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms