Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VCXQ9H320 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
VCXQ9H320 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.36■■□□□ 1.01
VCXQ9H320 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.36■■□□□ 1.01
VCXQ9H320 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VCXQ9H320 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.35■■□□□ 1.01
VCXQ9H320 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCXQ9H320 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
VCXQ9H320 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
VCXQ9H320 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
VCXQ9H320 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCXQ9H320 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCXQ9H320 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCXQ9H320 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCXQ9H320 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VCXQ9H320 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.34■■□□□ 1.01
VCXQ9H320 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
VCXQ9H320 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.34■■□□□ 1.01
VCXQ9H320 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCXQ9H320 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
VCXQ9H320 ESRRAP2-201ENST00000418437 1549 ntBASIC21.34■■□□□ 1.01
VCXQ9H320 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.33■■□□□ 1.01
VCXQ9H320 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VCXQ9H320 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VCXQ9H320 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
VCXQ9H320 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VCXQ9H320 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.33■■□□□ 1.01
VCXQ9H320 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VCXQ9H320 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.33■■□□□ 1
VCXQ9H320 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VCXQ9H320 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VCXQ9H320 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VCXQ9H320 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VCXQ9H320 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
VCXQ9H320 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.32■■□□□ 1
VCXQ9H320 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VCXQ9H320 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.32■■□□□ 1
VCXQ9H320 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VCXQ9H320 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
VCXQ9H320 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VCXQ9H320 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.32■■□□□ 1
VCXQ9H320 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
VCXQ9H320 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.31■■□□□ 1
VCXQ9H320 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VCXQ9H320 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
VCXQ9H320 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
VCXQ9H320 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
VCXQ9H320 AC126177.7-201ENST00000547904 679 ntBASIC21.31■■□□□ 1
VCXQ9H320 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
VCXQ9H320 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
VCXQ9H320 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VCXQ9H320 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VCXQ9H320 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
VCXQ9H320 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
VCXQ9H320 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.31■■□□□ 1
VCXQ9H320 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.31■■□□□ 1
VCXQ9H320 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VCXQ9H320 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VCXQ9H320 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VCXQ9H320 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.3■■□□□ 1
VCXQ9H320 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VCXQ9H320 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.3■■□□□ 1
VCXQ9H320 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VCXQ9H320 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.3■■□□□ 1
VCXQ9H320 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.3■■□□□ 1
VCXQ9H320 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
VCXQ9H320 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.3■■□□□ 1
VCXQ9H320 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
VCXQ9H320 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VCXQ9H320 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VCXQ9H320 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.29■■□□□ 1
VCXQ9H320 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.29■■□□□ 1
VCXQ9H320 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VCXQ9H320 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
VCXQ9H320 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VCXQ9H320 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.28■■□□□ 1
VCXQ9H320 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCXQ9H320 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
VCXQ9H320 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
VCXQ9H320 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.28■■□□□ 1
VCXQ9H320 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
VCXQ9H320 FBXW4P1-201ENST00000426721 2239 ntBASIC21.28■■□□□ 1
VCXQ9H320 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.28■■□□□ 1
VCXQ9H320 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.27■■□□□ 1
VCXQ9H320 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
VCXQ9H320 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms