Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.42□□□□□ -1.382e-6■■■■□ 25
CSTF2TQ9H0L4 MCM7-204ENST00000425308 1497 ntTSL 325.98■■□□□ 1.753e-9■■■■□ 25
CSTF2TQ9H0L4 MCM7-209ENST00000485286 2900 ntTSL 217.38■□□□□ 0.373e-9■■■■□ 25
CSTF2TQ9H0L4 MCM7-206ENST00000465688 481 ntTSL 317.06■□□□□ 0.323e-9■■■■□ 25
CSTF2TQ9H0L4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.48■□□□□ 0.233e-9■■■■□ 25
CSTF2TQ9H0L4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.76□□□□□ -0.213e-9■■■■□ 25
CSTF2TQ9H0L4 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.21□□□□□ -0.463e-9■■■■□ 25
CSTF2TQ9H0L4 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.593e-9■■■■□ 25
CSTF2TQ9H0L4 MCM7-205ENST00000463722 1327 ntTSL 511.02□□□□□ -0.653e-9■■■■□ 25
CSTF2TQ9H0L4 MCM7-210ENST00000489841 2515 ntTSL 1 (best)9.87□□□□□ -0.833e-9■■■■□ 25
CSTF2TQ9H0L4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.145e-7■■■■□ 25
CSTF2TQ9H0L4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.125e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.33■□□□□ 0.843e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-205ENST00000355657 2617 ntTSL 219.84■□□□□ 0.773e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.733e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.74■□□□□ 0.113e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-204ENST00000353068 684 ntTSL 1 (best) BASIC8.95□□□□□ -0.983e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-201ENST00000239117 555 ntTSL 1 (best)8.92□□□□□ -0.983e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.23e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-212ENST00000472764 847 ntTSL 57.25□□□□□ -1.253e-7■■■■□ 25
CSTF2TQ9H0L4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.74□□□□□ -1.333e-7■■■■□ 25
CSTF2TQ9H0L4 KLHL24-212ENST00000481126 389 ntTSL 219.59■□□□□ 0.733e-10■■■■□ 24.9
CSTF2TQ9H0L4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.85■■□□□ 1.099e-7■■■■□ 24.9
CSTF2TQ9H0L4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.33■□□□□ 0.529e-7■■■■□ 24.9
CSTF2TQ9H0L4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.86■□□□□ 0.131e-7■■■■□ 24.9
CSTF2TQ9H0L4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.661e-7■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.87■□□□□ 0.131e-6■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.62■□□□□ 0.091e-6■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.82□□□□□ -0.21e-6■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.56□□□□□ -0.241e-6■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-204ENST00000476263 891 ntTSL 510.96□□□□□ -0.651e-6■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-207ENST00000493172 861 ntTSL 2 BASIC10.68□□□□□ -0.71e-6■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-201ENST00000229922 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.751e-6■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-205ENST00000479291 1378 ntTSL 1 (best)9.38□□□□□ -0.911e-6■■■■□ 24.9
CSTF2TQ9H0L4 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC7.99□□□□□ -1.131e-6■■■■□ 24.9
CSTF2TQ9H0L4 TNK2-212ENST00000439230 2331 ntTSL 1 (best)16.73■□□□□ 0.279e-7■■■■□ 24.9
CSTF2TQ9H0L4 PITPNM1-210ENST00000527527 459 ntTSL 421.64■■□□□ 1.051e-7■■■■□ 24.9
CSTF2TQ9H0L4 PITPNM1-208ENST00000527103 308 ntTSL 420.8■□□□□ 0.921e-7■■■■□ 24.9
CSTF2TQ9H0L4 PITPNM1-203ENST00000524901 550 ntTSL 418.72■□□□□ 0.591e-7■■■■□ 24.9
CSTF2TQ9H0L4 ARMCX3-206ENST00000491568 973 ntTSL 1 (best)17.4■□□□□ 0.381e-7■■■■□ 24.9
CSTF2TQ9H0L4 ARMCX3-204ENST00000477980 833 ntTSL 316.37■□□□□ 0.211e-7■■■■□ 24.9
CSTF2TQ9H0L4 PACSIN2-210ENST00000453643 818 ntTSL 515.07■□□□□ 01e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.53□□□□□ -0.081e-7■■■■□ 24.9
CSTF2TQ9H0L4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.151e-7■■■■□ 24.9
CSTF2TQ9H0L4 ARMCX3-205ENST00000479298 637 ntTSL 514.08□□□□□ -0.161e-7■■■■□ 24.9
CSTF2TQ9H0L4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.171e-7■■■■□ 24.9
CSTF2TQ9H0L4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.81□□□□□ -0.21e-7■■■■□ 24.9
CSTF2TQ9H0L4 PITPNM1-211ENST00000528559 584 ntTSL 413.34□□□□□ -0.271e-7■■■■□ 24.9
CSTF2TQ9H0L4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.341e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.79□□□□□ -0.361e-7■■■■□ 24.9
CSTF2TQ9H0L4 PPM1F-209ENST00000497072 159 ntTSL 312.03□□□□□ -0.481e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCSK6-205ENST00000558433 543 ntTSL 411.86□□□□□ -0.511e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCSK6-212ENST00000560785 507 ntTSL 411.66□□□□□ -0.541e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.591e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.61e-7■■■■□ 24.9
CSTF2TQ9H0L4 PACSIN2-208ENST00000445706 511 ntTSL 511.25□□□□□ -0.611e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC11.2□□□□□ -0.621e-7■■■■□ 24.9
CSTF2TQ9H0L4 ARMCX3-201ENST00000341189 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.691e-7■■■■□ 24.9
CSTF2TQ9H0L4 ARMCX3-202ENST00000467808 506 ntTSL 210.13□□□□□ -0.791e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCSK6-207ENST00000558951 543 ntTSL 38.94□□□□□ -0.981e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCSK6-202ENST00000398185 3723 ntTSL 1 (best)8.76□□□□□ -1.011e-7■■■■□ 24.9
CSTF2TQ9H0L4 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.041e-7■■■■□ 24.9
CSTF2TQ9H0L4 PCSK6-206ENST00000558864 3868 ntTSL 26.66□□□□□ -1.341e-7■■■■□ 24.9
CSTF2TQ9H0L4 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)16.83■□□□□ 0.284e-7■■■■□ 24.9
CSTF2TQ9H0L4 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.672e-6■■■■□ 24.9
CSTF2TQ9H0L4 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.942e-6■■■■□ 24.9
CSTF2TQ9H0L4 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.982e-6■■■■□ 24.9
CSTF2TQ9H0L4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.487e-7■■■■□ 24.9
CSTF2TQ9H0L4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.87■□□□□ 0.777e-7■■■■□ 24.9
CSTF2TQ9H0L4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.65■□□□□ 0.265e-7■■■■□ 24.9
CSTF2TQ9H0L4 LINC00963-210ENST00000608272 612 ntTSL 512.41□□□□□ -0.421e-6■■■■□ 24.9
CSTF2TQ9H0L4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.4□□□□□ -0.264e-19■■■■□ 24.9
CSTF2TQ9H0L4 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC11.45□□□□□ -0.584e-19■■■■□ 24.9
CSTF2TQ9H0L4 AC069277.1-203ENST00000414603 517 ntTSL 38.85□□□□□ -0.994e-19■■■■□ 24.9
CSTF2TQ9H0L4 ADCY7-210ENST00000567277 2304 ntTSL 1 (best)15.26■□□□□ 0.034e-7■■■■□ 24.9
CSTF2TQ9H0L4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.63□□□□□ -0.074e-7■■■■□ 24.9
CSTF2TQ9H0L4 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.384e-7■■■■□ 24.9
CSTF2TQ9H0L4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.9■□□□□ 0.33e-10■■■■□ 24.9
CSTF2TQ9H0L4 ZMYND8-214ENST00000467200 3634 ntAPPRIS ALT2 TSL 1 (best)9.04□□□□□ -0.964e-11■■■■□ 24.9
CSTF2TQ9H0L4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.445e-25■■■■□ 24.9
CSTF2TQ9H0L4 UBE3C-207ENST00000494532 543 ntTSL 212.85□□□□□ -0.355e-25■■■■□ 24.9
CSTF2TQ9H0L4 UBE3C-205ENST00000470408 5197 ntTSL 29.12□□□□□ -0.955e-25■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-202ENST00000526656 862 ntTSL 322.58■■□□□ 1.212e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-203ENST00000527038 629 ntTSL 220.99■□□□□ 0.952e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-201ENST00000526354 568 ntTSL 220.37■□□□□ 0.852e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-214ENST00000534233 711 ntTSL 219.62■□□□□ 0.732e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-206ENST00000530467 552 ntTSL 418.27■□□□□ 0.522e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-213ENST00000533381 694 ntTSL 317.94■□□□□ 0.465e-8■■■■□ 24.9
CSTF2TQ9H0L4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.92■□□□□ 0.466e-7■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-211ENST00000532421 582 ntTSL 217.32■□□□□ 0.362e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-205ENST00000529174 549 ntTSL 417.12■□□□□ 0.332e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.85■□□□□ 0.292e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-215ENST00000543287 2464 ntTSL 216.75■□□□□ 0.272e-8■■■■□ 24.9
CSTF2TQ9H0L4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.56■□□□□ 0.242e-7■■■■□ 24.9
CSTF2TQ9H0L4 HDGFL2-204ENST00000592691 740 ntTSL 215.55■□□□□ 0.082e-7■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-222ENST00000622474 549 ntTSL 215.18■□□□□ 0.022e-8■■■■□ 24.9
CSTF2TQ9H0L4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 02e-7■■■■□ 24.9
CSTF2TQ9H0L4 LINC01237-205ENST00000457686 586 ntTSL 414.19□□□□□ -0.142e-7■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-216ENST00000610597 491 ntTSL 414.09□□□□□ -0.152e-8■■■■□ 24.9
CSTF2TQ9H0L4 HYOU1-210ENST00000531968 550 ntTSL 413.19□□□□□ -0.32e-8■■■■□ 24.9
Retrieved 100 of 19,151 protein–RNA pairs in 184.1 ms