Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PKP2Q99959 AC060814.1-201ENST00000554326 538 ntBASIC21.08■□□□□ 0.97
PKP2Q99959 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.08■□□□□ 0.96
PKP2Q99959 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
PKP2Q99959 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PKP2Q99959 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
PKP2Q99959 AC090877.2-201ENST00000558441 1738 ntBASIC21.07■□□□□ 0.96
PKP2Q99959 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.07■□□□□ 0.96
PKP2Q99959 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.07■□□□□ 0.96
PKP2Q99959 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PKP2Q99959 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PKP2Q99959 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PKP2Q99959 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PKP2Q99959 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PKP2Q99959 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PKP2Q99959 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PKP2Q99959 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PKP2Q99959 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PKP2Q99959 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.06■□□□□ 0.96
PKP2Q99959 AC093536.1-201ENST00000569153 554 ntBASIC21.06■□□□□ 0.96
PKP2Q99959 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PKP2Q99959 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP2Q99959 AC080038.3-201ENST00000623346 1952 ntBASIC21.06■□□□□ 0.96
PKP2Q99959 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP2Q99959 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP2Q99959 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PKP2Q99959 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP2Q99959 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PKP2Q99959 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP2Q99959 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP2Q99959 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PKP2Q99959 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.05■□□□□ 0.96
PKP2Q99959 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.05■□□□□ 0.96
PKP2Q99959 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP2Q99959 KRT18P10-201ENST00000388836 1287 ntBASIC21.05■□□□□ 0.96
PKP2Q99959 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP2Q99959 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.05■□□□□ 0.96
PKP2Q99959 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.05■□□□□ 0.96
PKP2Q99959 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PKP2Q99959 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.05■□□□□ 0.96
PKP2Q99959 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PKP2Q99959 AC073130.3-201ENST00000624389 2278 ntBASIC21.04■□□□□ 0.96
PKP2Q99959 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP2Q99959 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PKP2Q99959 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.04■□□□□ 0.96
PKP2Q99959 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP2Q99959 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP2Q99959 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP2Q99959 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
PKP2Q99959 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP2Q99959 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP2Q99959 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP2Q99959 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.03■□□□□ 0.96
PKP2Q99959 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP2Q99959 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP2Q99959 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.03■□□□□ 0.96
PKP2Q99959 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.03■□□□□ 0.96
PKP2Q99959 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP2Q99959 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.03■□□□□ 0.96
PKP2Q99959 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP2Q99959 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PKP2Q99959 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP2Q99959 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
PKP2Q99959 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PKP2Q99959 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP2Q99959 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PKP2Q99959 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP2Q99959 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.02■□□□□ 0.96
PKP2Q99959 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PKP2Q99959 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.02■□□□□ 0.95
PKP2Q99959 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.01■□□□□ 0.95
PKP2Q99959 AC092296.2-201ENST00000589470 999 ntBASIC21.01■□□□□ 0.95
PKP2Q99959 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP2Q99959 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP2Q99959 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PKP2Q99959 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.01■□□□□ 0.95
PKP2Q99959 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP2Q99959 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP2Q99959 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP2Q99959 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PKP2Q99959 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PKP2Q99959 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PKP2Q99959 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP2Q99959 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PKP2Q99959 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP2Q99959 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21■□□□□ 0.95
PKP2Q99959 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PKP2Q99959 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
PKP2Q99959 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP2Q99959 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PKP2Q99959 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms