Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLCC1Q96S66 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLCC1Q96S66 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 ABCB10P4-201ENST00000566803 2184 ntBASIC18.68■□□□□ 0.58
CLCC1Q96S66 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 LONRF2P2-201ENST00000439212 571 ntBASIC18.68■□□□□ 0.58
CLCC1Q96S66 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLCC1Q96S66 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLCC1Q96S66 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCC1Q96S66 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLCC1Q96S66 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCC1Q96S66 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCC1Q96S66 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCC1Q96S66 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCC1Q96S66 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCC1Q96S66 AL592295.1-201ENST00000400984 884 ntBASIC18.67■□□□□ 0.58
CLCC1Q96S66 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCC1Q96S66 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCC1Q96S66 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCC1Q96S66 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLCC1Q96S66 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCC1Q96S66 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CLCC1Q96S66 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
CLCC1Q96S66 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCC1Q96S66 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLCC1Q96S66 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCC1Q96S66 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCC1Q96S66 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCC1Q96S66 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCC1Q96S66 AC010980.1-201ENST00000587192 1142 ntBASIC18.66■□□□□ 0.58
CLCC1Q96S66 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CLCC1Q96S66 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCC1Q96S66 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCC1Q96S66 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCC1Q96S66 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCC1Q96S66 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCC1Q96S66 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 HLA-L-211ENST00000482052 1765 ntBASIC18.65■□□□□ 0.58
CLCC1Q96S66 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCC1Q96S66 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCC1Q96S66 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.64■□□□□ 0.58
CLCC1Q96S66 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCC1Q96S66 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.64■□□□□ 0.57
CLCC1Q96S66 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCC1Q96S66 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCC1Q96S66 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCC1Q96S66 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCC1Q96S66 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCC1Q96S66 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCC1Q96S66 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLCC1Q96S66 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCC1Q96S66 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCC1Q96S66 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCC1Q96S66 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCC1Q96S66 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCC1Q96S66 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCC1Q96S66 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCC1Q96S66 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.63■□□□□ 0.57
CLCC1Q96S66 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLCC1Q96S66 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CLCC1Q96S66 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CLCC1Q96S66 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCC1Q96S66 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCC1Q96S66 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCC1Q96S66 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCC1Q96S66 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 AC007375.3-201ENST00000600936 2314 ntBASIC18.62■□□□□ 0.57
CLCC1Q96S66 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCC1Q96S66 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms