Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
NECTIN4Q96NY8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NECTIN4Q96NY8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NECTIN4Q96NY8 AP005435.1-201ENST00000529293 1178 ntBASIC23.42■■□□□ 1.34
NECTIN4Q96NY8 AC080038.1-201ENST00000611274 1154 ntBASIC23.42■■□□□ 1.34
NECTIN4Q96NY8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NECTIN4Q96NY8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NECTIN4Q96NY8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NECTIN4Q96NY8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.41■■□□□ 1.34
NECTIN4Q96NY8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
NECTIN4Q96NY8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.41■■□□□ 1.34
NECTIN4Q96NY8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
NECTIN4Q96NY8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NECTIN4Q96NY8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NECTIN4Q96NY8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NECTIN4Q96NY8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NECTIN4Q96NY8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.39■■□□□ 1.34
NECTIN4Q96NY8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.39■■□□□ 1.34
NECTIN4Q96NY8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.39■■□□□ 1.33
NECTIN4Q96NY8 AC006015.1-201ENST00000429970 570 ntBASIC23.39■■□□□ 1.33
NECTIN4Q96NY8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.39■■□□□ 1.33
NECTIN4Q96NY8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
NECTIN4Q96NY8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.39■■□□□ 1.33
NECTIN4Q96NY8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NECTIN4Q96NY8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.39■■□□□ 1.33
NECTIN4Q96NY8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
NECTIN4Q96NY8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 AC091060.1-201ENST00000623524 1766 ntBASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 AC010525.1-201ENST00000585559 441 ntBASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NECTIN4Q96NY8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 AC016769.1-201ENST00000409132 1010 ntBASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 AC105233.4-201ENST00000642045 216 ntBASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NECTIN4Q96NY8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.36■■□□□ 1.33
NECTIN4Q96NY8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NECTIN4Q96NY8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.36■■□□□ 1.33
NECTIN4Q96NY8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.36■■□□□ 1.33
NECTIN4Q96NY8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.36■■□□□ 1.33
NECTIN4Q96NY8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NECTIN4Q96NY8 FP325331.1-202ENST00000623531 1380 ntBASIC23.36■■□□□ 1.33
NECTIN4Q96NY8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
NECTIN4Q96NY8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 HLA-L-211ENST00000482052 1765 ntBASIC23.35■■□□□ 1.33
NECTIN4Q96NY8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 AC137761.2-201ENST00000561729 223 ntBASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 AC145350.3-201ENST00000569033 163 ntBASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
NECTIN4Q96NY8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NECTIN4Q96NY8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NECTIN4Q96NY8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NECTIN4Q96NY8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms