Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 AC135279.3-201ENST00000610945 1311 ntBASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 AC092171.4-201ENST00000609130 632 ntBASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 AC241377.3-202ENST00000626088 1088 ntBASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 AC241585.3-202ENST00000628937 1088 ntBASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 AC245100.8-202ENST00000629247 1058 ntBASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 SYT6-210ENST00000641643 1587 ntBASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 AC019069.1-201ENST00000610008 1333 ntBASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 DUX4L19-201ENST00000557448 1267 ntBASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRICKLE1Q96MT3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.15■■□□□ 1.3
PRICKLE1Q96MT3 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.15■■□□□ 1.3
PRICKLE1Q96MT3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRICKLE1Q96MT3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.15■■□□□ 1.3
PRICKLE1Q96MT3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRICKLE1Q96MT3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRICKLE1Q96MT3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.15■■□□□ 1.3
PRICKLE1Q96MT3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRICKLE1Q96MT3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PRICKLE1Q96MT3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PRICKLE1Q96MT3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PRICKLE1Q96MT3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.14■■□□□ 1.29
PRICKLE1Q96MT3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.14■■□□□ 1.29
PRICKLE1Q96MT3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PRICKLE1Q96MT3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.14■■□□□ 1.29
PRICKLE1Q96MT3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PRICKLE1Q96MT3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 AC133561.4-201ENST00000566112 224 ntBASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 AL031432.3-201ENST00000607698 485 ntBASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PRICKLE1Q96MT3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 AC012676.1-201ENST00000574705 1949 ntBASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
PRICKLE1Q96MT3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 AC005837.3-201ENST00000612163 286 ntBASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE1Q96MT3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 MIR3181-201ENST00000578512 73 ntBASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 MIR4767-201ENST00000582827 78 ntBASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.1■■□□□ 1.29
PRICKLE1Q96MT3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms