Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CALR3Q96L12 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CALR3Q96L12 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CALR3Q96L12 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CALR3Q96L12 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.67■■□□□ 1.38
CALR3Q96L12 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CALR3Q96L12 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CALR3Q96L12 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CALR3Q96L12 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.67■■□□□ 1.38
CALR3Q96L12 PVT1_1.1-201ENST00000615125 194 ntBASIC23.67■■□□□ 1.38
CALR3Q96L12 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CALR3Q96L12 AC242852.2-201ENST00000615738 1807 ntBASIC23.67■■□□□ 1.38
CALR3Q96L12 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CALR3Q96L12 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CALR3Q96L12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CALR3Q96L12 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CALR3Q96L12 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.66■■□□□ 1.38
CALR3Q96L12 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CALR3Q96L12 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.66■■□□□ 1.38
CALR3Q96L12 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CALR3Q96L12 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CALR3Q96L12 TSPY13P-201ENST00000338964 914 ntBASIC23.66■■□□□ 1.38
CALR3Q96L12 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.66■■□□□ 1.38
CALR3Q96L12 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.66■■□□□ 1.38
CALR3Q96L12 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CALR3Q96L12 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CALR3Q96L12 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CALR3Q96L12 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CALR3Q96L12 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CALR3Q96L12 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CALR3Q96L12 AC137767.1-201ENST00000602918 1920 ntBASIC23.65■■□□□ 1.38
CALR3Q96L12 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.65■■□□□ 1.38
CALR3Q96L12 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CALR3Q96L12 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CALR3Q96L12 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CALR3Q96L12 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CALR3Q96L12 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.65■■□□□ 1.38
CALR3Q96L12 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CALR3Q96L12 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
CALR3Q96L12 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CALR3Q96L12 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CALR3Q96L12 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.64■■□□□ 1.37
CALR3Q96L12 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CALR3Q96L12 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CALR3Q96L12 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.63■■□□□ 1.37
CALR3Q96L12 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.63■■□□□ 1.37
CALR3Q96L12 AL353803.4-201ENST00000565882 1934 ntBASIC23.63■■□□□ 1.37
CALR3Q96L12 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CALR3Q96L12 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CALR3Q96L12 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CALR3Q96L12 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.63■■□□□ 1.37
CALR3Q96L12 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.63■■□□□ 1.37
CALR3Q96L12 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CALR3Q96L12 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.63■■□□□ 1.37
CALR3Q96L12 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
CALR3Q96L12 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CALR3Q96L12 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CALR3Q96L12 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.63■■□□□ 1.37
CALR3Q96L12 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CALR3Q96L12 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.63■■□□□ 1.37
CALR3Q96L12 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.62■■□□□ 1.37
CALR3Q96L12 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CALR3Q96L12 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.62■■□□□ 1.37
CALR3Q96L12 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CALR3Q96L12 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CALR3Q96L12 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CALR3Q96L12 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CALR3Q96L12 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.62■■□□□ 1.37
CALR3Q96L12 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.62■■□□□ 1.37
CALR3Q96L12 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CALR3Q96L12 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CALR3Q96L12 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.62■■□□□ 1.37
CALR3Q96L12 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CALR3Q96L12 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CALR3Q96L12 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CALR3Q96L12 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CALR3Q96L12 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CALR3Q96L12 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.61■■□□□ 1.37
CALR3Q96L12 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.61■■□□□ 1.37
CALR3Q96L12 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.61■■□□□ 1.37
CALR3Q96L12 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CALR3Q96L12 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CALR3Q96L12 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CALR3Q96L12 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.61■■□□□ 1.37
CALR3Q96L12 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.61■■□□□ 1.37
CALR3Q96L12 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CALR3Q96L12 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CALR3Q96L12 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CALR3Q96L12 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
CALR3Q96L12 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
CALR3Q96L12 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CALR3Q96L12 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.6■■□□□ 1.37
CALR3Q96L12 AC010980.1-201ENST00000587192 1142 ntBASIC23.6■■□□□ 1.37
CALR3Q96L12 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
CALR3Q96L12 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CALR3Q96L12 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.6■■□□□ 1.37
CALR3Q96L12 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.6■■□□□ 1.37
CALR3Q96L12 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CALR3Q96L12 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
CALR3Q96L12 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms