Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC096631.2-201ENST00000436136 790 ntBASIC23.5■■□□□ 1.35
RNF139Q8WU17 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF139Q8WU17 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.5■■□□□ 1.35
RNF139Q8WU17 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF139Q8WU17 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF139Q8WU17 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF139Q8WU17 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
RNF139Q8WU17 DUX4L19-201ENST00000557448 1267 ntBASIC23.49■■□□□ 1.35
RNF139Q8WU17 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.49■■□□□ 1.35
RNF139Q8WU17 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF139Q8WU17 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF139Q8WU17 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF139Q8WU17 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF139Q8WU17 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.49■■□□□ 1.35
RNF139Q8WU17 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF139Q8WU17 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
RNF139Q8WU17 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
RNF139Q8WU17 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF139Q8WU17 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF139Q8WU17 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF139Q8WU17 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.47■■□□□ 1.35
RNF139Q8WU17 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RNF139Q8WU17 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF139Q8WU17 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF139Q8WU17 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF139Q8WU17 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.47■■□□□ 1.35
RNF139Q8WU17 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RNF139Q8WU17 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF139Q8WU17 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF139Q8WU17 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF139Q8WU17 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF139Q8WU17 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF139Q8WU17 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF139Q8WU17 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF139Q8WU17 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF139Q8WU17 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RNF139Q8WU17 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF139Q8WU17 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RNF139Q8WU17 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF139Q8WU17 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF139Q8WU17 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RNF139Q8WU17 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RNF139Q8WU17 AC009086.3-201ENST00000623486 1008 ntBASIC23.46■■□□□ 1.35
RNF139Q8WU17 SYT6-210ENST00000641643 1587 ntBASIC23.46■■□□□ 1.35
RNF139Q8WU17 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF139Q8WU17 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RNF139Q8WU17 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RNF139Q8WU17 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.45■■□□□ 1.34
RNF139Q8WU17 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF139Q8WU17 UNC93B3-201ENST00000308076 687 ntBASIC23.45■■□□□ 1.34
RNF139Q8WU17 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RNF139Q8WU17 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.45■■□□□ 1.34
RNF139Q8WU17 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF139Q8WU17 AL139246.5-201ENST00000606645 996 ntBASIC23.45■■□□□ 1.34
RNF139Q8WU17 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF139Q8WU17 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
RNF139Q8WU17 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.45■■□□□ 1.34
RNF139Q8WU17 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.45■■□□□ 1.34
RNF139Q8WU17 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF139Q8WU17 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF139Q8WU17 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF139Q8WU17 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RNF139Q8WU17 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.44■■□□□ 1.34
RNF139Q8WU17 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF139Q8WU17 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.44■■□□□ 1.34
RNF139Q8WU17 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF139Q8WU17 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF139Q8WU17 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RNF139Q8WU17 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
RNF139Q8WU17 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
RNF139Q8WU17 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF139Q8WU17 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
RNF139Q8WU17 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF139Q8WU17 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF139Q8WU17 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.43■■□□□ 1.34
RNF139Q8WU17 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF139Q8WU17 AC110285.6-201ENST00000617652 491 ntBASIC23.43■■□□□ 1.34
RNF139Q8WU17 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF139Q8WU17 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.43■■□□□ 1.34
RNF139Q8WU17 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
RNF139Q8WU17 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF139Q8WU17 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF139Q8WU17 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF139Q8WU17 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF139Q8WU17 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
RNF139Q8WU17 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF139Q8WU17 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF139Q8WU17 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.42■■□□□ 1.34
RNF139Q8WU17 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.42■■□□□ 1.34
RNF139Q8WU17 AL136162.1-201ENST00000607711 1078 ntBASIC23.42■■□□□ 1.34
RNF139Q8WU17 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
RNF139Q8WU17 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF139Q8WU17 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF139Q8WU17 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF139Q8WU17 FP325331.1-202ENST00000623531 1380 ntBASIC23.41■■□□□ 1.34
RNF139Q8WU17 AC144652.1-201ENST00000609974 1624 ntBASIC23.41■■□□□ 1.34
RNF139Q8WU17 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF139Q8WU17 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF139Q8WU17 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RNF139Q8WU17 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms