Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL22A1Q8NFW1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL22A1Q8NFW1 CD99P1-205ENST00000527459 561 ntBASIC30.57■■■□□ 2.48
COL22A1Q8NFW1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC30.57■■■□□ 2.48
COL22A1Q8NFW1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL22A1Q8NFW1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL22A1Q8NFW1 AC004854.2-201ENST00000608450 1441 ntBASIC30.57■■■□□ 2.48
COL22A1Q8NFW1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL22A1Q8NFW1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.56■■■□□ 2.48
COL22A1Q8NFW1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.56■■■□□ 2.48
COL22A1Q8NFW1 AC105233.4-201ENST00000642045 216 ntBASIC30.56■■■□□ 2.48
COL22A1Q8NFW1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.56■■■□□ 2.48
COL22A1Q8NFW1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC30.56■■■□□ 2.48
COL22A1Q8NFW1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.56■■■□□ 2.48
COL22A1Q8NFW1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 APTR-205ENST00000447009 902 ntTSL 2 BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC30.55■■■□□ 2.48
COL22A1Q8NFW1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.54■■■□□ 2.48
COL22A1Q8NFW1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
COL22A1Q8NFW1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL22A1Q8NFW1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL22A1Q8NFW1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.54■■■□□ 2.48
COL22A1Q8NFW1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
COL22A1Q8NFW1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
COL22A1Q8NFW1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.53■■■□□ 2.48
COL22A1Q8NFW1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC30.53■■■□□ 2.48
COL22A1Q8NFW1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.53■■■□□ 2.48
COL22A1Q8NFW1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL22A1Q8NFW1 AL161729.1-201ENST00000604104 1402 ntBASIC30.52■■■□□ 2.48
COL22A1Q8NFW1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.52■■■□□ 2.48
COL22A1Q8NFW1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC30.52■■■□□ 2.48
COL22A1Q8NFW1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC30.52■■■□□ 2.48
COL22A1Q8NFW1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
COL22A1Q8NFW1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
COL22A1Q8NFW1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
COL22A1Q8NFW1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.51■■■□□ 2.48
COL22A1Q8NFW1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL22A1Q8NFW1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL22A1Q8NFW1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
COL22A1Q8NFW1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
COL22A1Q8NFW1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
COL22A1Q8NFW1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
COL22A1Q8NFW1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
COL22A1Q8NFW1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL22A1Q8NFW1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL22A1Q8NFW1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL22A1Q8NFW1 COX20-201ENST00000366528 568 ntTSL 2 BASIC30.5■■■□□ 2.47
COL22A1Q8NFW1 GUSBP6-202ENST00000438529 1198 ntBASIC30.5■■■□□ 2.47
COL22A1Q8NFW1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL22A1Q8NFW1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
COL22A1Q8NFW1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL22A1Q8NFW1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL22A1Q8NFW1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
COL22A1Q8NFW1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
COL22A1Q8NFW1 AL050303.2-201ENST00000619798 666 ntBASIC30.49■■■□□ 2.47
COL22A1Q8NFW1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.49■■■□□ 2.47
COL22A1Q8NFW1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
COL22A1Q8NFW1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
COL22A1Q8NFW1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.48■■■□□ 2.47
COL22A1Q8NFW1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.48■■■□□ 2.47
COL22A1Q8NFW1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.48■■■□□ 2.47
COL22A1Q8NFW1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
COL22A1Q8NFW1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
COL22A1Q8NFW1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC30.47■■■□□ 2.47
COL22A1Q8NFW1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
COL22A1Q8NFW1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC30.47■■■□□ 2.47
COL22A1Q8NFW1 TSPY20P-201ENST00000450910 630 ntBASIC30.47■■■□□ 2.47
COL22A1Q8NFW1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.47■■■□□ 2.47
COL22A1Q8NFW1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC30.47■■■□□ 2.47
COL22A1Q8NFW1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL22A1Q8NFW1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC30.46■■■□□ 2.47
COL22A1Q8NFW1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL22A1Q8NFW1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL22A1Q8NFW1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
COL22A1Q8NFW1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL22A1Q8NFW1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
COL22A1Q8NFW1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
COL22A1Q8NFW1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
COL22A1Q8NFW1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
COL22A1Q8NFW1 KRT18P6-201ENST00000555540 1265 ntBASIC30.45■■■□□ 2.47
COL22A1Q8NFW1 MIR4651-201ENST00000582622 73 ntBASIC30.45■■■□□ 2.47
COL22A1Q8NFW1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC30.45■■■□□ 2.47
COL22A1Q8NFW1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
COL22A1Q8NFW1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
COL22A1Q8NFW1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
COL22A1Q8NFW1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
COL22A1Q8NFW1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL22A1Q8NFW1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
COL22A1Q8NFW1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
COL22A1Q8NFW1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
COL22A1Q8NFW1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL22A1Q8NFW1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.44■■■□□ 2.46
COL22A1Q8NFW1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.44■■■□□ 2.46
COL22A1Q8NFW1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms