Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK2A3Q8NEV1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.41■□□□□ 0.7
CSNK2A3Q8NEV1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 AC092028.1-203ENST00000608262 953 ntBASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 AC005703.6-201ENST00000623265 1329 ntBASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.4■□□□□ 0.7
CSNK2A3Q8NEV1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 MIR4787-201ENST00000607364 84 ntBASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSNK2A3Q8NEV1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 AC009299.2-201ENST00000482477 511 ntBASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 AL117328.2-201ENST00000624617 1940 ntBASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSNK2A3Q8NEV1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms