Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.98■□□□□ 0.95
PSD4Q8NDX1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PSD4Q8NDX1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
PSD4Q8NDX1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PSD4Q8NDX1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.98■□□□□ 0.95
PSD4Q8NDX1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PSD4Q8NDX1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.98■□□□□ 0.95
PSD4Q8NDX1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.98■□□□□ 0.95
PSD4Q8NDX1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 C9orf163-202ENST00000624034 2573 ntBASIC20.97■□□□□ 0.95
PSD4Q8NDX1 AL161729.1-201ENST00000604104 1402 ntBASIC20.97■□□□□ 0.95
PSD4Q8NDX1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PSD4Q8NDX1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSD4Q8NDX1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.95■□□□□ 0.94
PSD4Q8NDX1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PSD4Q8NDX1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PSD4Q8NDX1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PSD4Q8NDX1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.92■□□□□ 0.94
PSD4Q8NDX1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 AL139246.5-201ENST00000606645 996 ntBASIC20.91■□□□□ 0.94
PSD4Q8NDX1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PSD4Q8NDX1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 AC019069.1-201ENST00000610008 1333 ntBASIC20.9■□□□□ 0.94
PSD4Q8NDX1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 SRD5A1P1-201ENST00000442297 786 ntBASIC20.9■□□□□ 0.94
PSD4Q8NDX1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.9■□□□□ 0.94
PSD4Q8NDX1 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PSD4Q8NDX1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms