Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 AC131212.1-201ENST00000613771 668 ntBASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNRF1Q8ND25 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNRF1Q8ND25 AC144652.1-201ENST00000609974 1624 ntBASIC18.71■□□□□ 0.58
ZNRF1Q8ND25 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 AL353803.4-201ENST00000565882 1934 ntBASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNRF1Q8ND25 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 C9orf163-202ENST00000624034 2573 ntBASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 C17orf82-201ENST00000623772 1530 ntBASIC18.69■□□□□ 0.58
ZNRF1Q8ND25 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF1Q8ND25 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNRF1Q8ND25 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 DUSP8P3-201ENST00000399571 1760 ntBASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF1Q8ND25 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF1Q8ND25 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms