Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.49■■□□□ 1.35
SMRP1Q8NCR6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SMRP1Q8NCR6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.49■■□□□ 1.35
SMRP1Q8NCR6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.49■■□□□ 1.35
SMRP1Q8NCR6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
SMRP1Q8NCR6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.49■■□□□ 1.35
SMRP1Q8NCR6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 ESRRAP2-201ENST00000418437 1549 ntBASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMRP1Q8NCR6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 AC026185.1-201ENST00000445748 174 ntBASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 AP005435.1-201ENST00000529293 1178 ntBASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 AC105233.4-201ENST00000642045 216 ntBASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMRP1Q8NCR6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.46■■□□□ 1.35
SMRP1Q8NCR6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SMRP1Q8NCR6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SMRP1Q8NCR6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.45■■□□□ 1.34
SMRP1Q8NCR6 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.45■■□□□ 1.34
SMRP1Q8NCR6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.45■■□□□ 1.34
SMRP1Q8NCR6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.45■■□□□ 1.34
SMRP1Q8NCR6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SMRP1Q8NCR6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SMRP1Q8NCR6 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.44■■□□□ 1.34
SMRP1Q8NCR6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
SMRP1Q8NCR6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SMRP1Q8NCR6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 AL355802.2-201ENST00000402069 882 ntBASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMRP1Q8NCR6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 BID-214ENST00000617586 542 ntTSL 5 BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
SMRP1Q8NCR6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
SMRP1Q8NCR6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.4■■□□□ 1.34
SMRP1Q8NCR6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
SMRP1Q8NCR6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMRP1Q8NCR6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SMRP1Q8NCR6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMRP1Q8NCR6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.4■■□□□ 1.34
SMRP1Q8NCR6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms