Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF7Q8N684 ESRRAP2-201ENST00000418437 1549 ntBASIC21.88■■□□□ 1.09
CPSF7Q8N684 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF7Q8N684 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
CPSF7Q8N684 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF7Q8N684 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF7Q8N684 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF7Q8N684 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF7Q8N684 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF7Q8N684 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF7Q8N684 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.87■■□□□ 1.09
CPSF7Q8N684 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CPSF7Q8N684 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.87■■□□□ 1.09
CPSF7Q8N684 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.87■■□□□ 1.09
CPSF7Q8N684 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.87■■□□□ 1.09
CPSF7Q8N684 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF7Q8N684 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF7Q8N684 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF7Q8N684 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF7Q8N684 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CPSF7Q8N684 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CPSF7Q8N684 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.86■■□□□ 1.09
CPSF7Q8N684 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.86■■□□□ 1.09
CPSF7Q8N684 AC242852.2-201ENST00000615738 1807 ntBASIC21.86■■□□□ 1.09
CPSF7Q8N684 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF7Q8N684 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF7Q8N684 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CPSF7Q8N684 AL022069.1-201ENST00000568025 1636 ntBASIC21.86■■□□□ 1.09
CPSF7Q8N684 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF7Q8N684 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF7Q8N684 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF7Q8N684 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF7Q8N684 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.85■■□□□ 1.09
CPSF7Q8N684 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CPSF7Q8N684 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.85■■□□□ 1.09
CPSF7Q8N684 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CPSF7Q8N684 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF7Q8N684 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CPSF7Q8N684 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.84■■□□□ 1.09
CPSF7Q8N684 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.84■■□□□ 1.09
CPSF7Q8N684 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF7Q8N684 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF7Q8N684 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.84■■□□□ 1.09
CPSF7Q8N684 AL592295.1-201ENST00000400984 884 ntBASIC21.84■■□□□ 1.09
CPSF7Q8N684 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.84■■□□□ 1.09
CPSF7Q8N684 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF7Q8N684 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.84■■□□□ 1.09
CPSF7Q8N684 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF7Q8N684 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CPSF7Q8N684 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPSF7Q8N684 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CPSF7Q8N684 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPSF7Q8N684 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPSF7Q8N684 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.83■■□□□ 1.09
CPSF7Q8N684 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CPSF7Q8N684 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPSF7Q8N684 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPSF7Q8N684 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
CPSF7Q8N684 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPSF7Q8N684 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPSF7Q8N684 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.82■■□□□ 1.08
CPSF7Q8N684 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CPSF7Q8N684 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CPSF7Q8N684 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.81■■□□□ 1.08
CPSF7Q8N684 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF7Q8N684 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.81■■□□□ 1.08
CPSF7Q8N684 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF7Q8N684 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF7Q8N684 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF7Q8N684 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.81■■□□□ 1.08
CPSF7Q8N684 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.81■■□□□ 1.08
CPSF7Q8N684 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.81■■□□□ 1.08
CPSF7Q8N684 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF7Q8N684 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF7Q8N684 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF7Q8N684 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF7Q8N684 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CPSF7Q8N684 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF7Q8N684 ALDH1A3-203ENST00000557963 1670 ntBASIC21.8■■□□□ 1.08
CPSF7Q8N684 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF7Q8N684 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CPSF7Q8N684 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.8■■□□□ 1.08
CPSF7Q8N684 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CPSF7Q8N684 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF7Q8N684 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.8■■□□□ 1.08
CPSF7Q8N684 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF7Q8N684 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CPSF7Q8N684 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF7Q8N684 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.79■■□□□ 1.08
CPSF7Q8N684 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF7Q8N684 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms