Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 FP325331.1-202ENST00000623531 1380 ntBASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 AC090192.1-201ENST00000517740 490 ntBASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 AC135731.1-201ENST00000569415 2548 ntBASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NPAS4Q8IUM7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 AL137784.2-201ENST00000607332 1000 ntBASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
NPAS4Q8IUM7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 DUX4L4-201ENST00000566884 1269 ntBASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 AC010525.1-201ENST00000585559 441 ntBASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.25■■□□□ 1.47
NPAS4Q8IUM7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.24■■□□□ 1.47
NPAS4Q8IUM7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NPAS4Q8IUM7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NPAS4Q8IUM7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.23■■□□□ 1.47
NPAS4Q8IUM7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
NPAS4Q8IUM7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.23■■□□□ 1.47
NPAS4Q8IUM7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPAS4Q8IUM7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPAS4Q8IUM7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPAS4Q8IUM7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPAS4Q8IUM7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.22■■□□□ 1.47
NPAS4Q8IUM7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NPAS4Q8IUM7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NPAS4Q8IUM7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NPAS4Q8IUM7 CCDC92B-201ENST00000575506 885 ntBASIC24.22■■□□□ 1.47
NPAS4Q8IUM7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.22■■□□□ 1.47
NPAS4Q8IUM7 AC092437.1-201ENST00000624794 1048 ntBASIC24.22■■□□□ 1.47
NPAS4Q8IUM7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NPAS4Q8IUM7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NPAS4Q8IUM7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
NPAS4Q8IUM7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NPAS4Q8IUM7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.21■■□□□ 1.47
NPAS4Q8IUM7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.21■■□□□ 1.47
NPAS4Q8IUM7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NPAS4Q8IUM7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
NPAS4Q8IUM7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
NPAS4Q8IUM7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NPAS4Q8IUM7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NPAS4Q8IUM7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.2■■□□□ 1.46
NPAS4Q8IUM7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.2■■□□□ 1.46
NPAS4Q8IUM7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
NPAS4Q8IUM7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NPAS4Q8IUM7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
NPAS4Q8IUM7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 AP005435.1-201ENST00000529293 1178 ntBASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms