Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 LETM1P2-201ENST00000597330 2178 ntBASIC11.98□□□□□ -0.49
LCA10Q71F78 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC11.98□□□□□ -0.49
LCA10Q71F78 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC11.98□□□□□ -0.49
LCA10Q71F78 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
LCA10Q71F78 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LCA10Q71F78 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC11.98□□□□□ -0.49
LCA10Q71F78 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 CHML-204ENST00000638121 920 ntTSL 2 BASIC11.98□□□□□ -0.49
LCA10Q71F78 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC11.98□□□□□ -0.49
LCA10Q71F78 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LCA10Q71F78 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LCA10Q71F78 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC11.97□□□□□ -0.49
LCA10Q71F78 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LCA10Q71F78 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LCA10Q71F78 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LCA10Q71F78 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC11.97□□□□□ -0.49
LCA10Q71F78 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LCA10Q71F78 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LCA10Q71F78 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC11.97□□□□□ -0.49
LCA10Q71F78 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
LCA10Q71F78 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
LCA10Q71F78 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC11.97□□□□□ -0.49
LCA10Q71F78 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LCA10Q71F78 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LCA10Q71F78 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LCA10Q71F78 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
LCA10Q71F78 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
LCA10Q71F78 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LCA10Q71F78 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC11.96□□□□□ -0.49
LCA10Q71F78 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LCA10Q71F78 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LCA10Q71F78 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
LCA10Q71F78 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LCA10Q71F78 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
LCA10Q71F78 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
LCA10Q71F78 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LCA10Q71F78 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
LCA10Q71F78 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LCA10Q71F78 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
LCA10Q71F78 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC11.95□□□□□ -0.5
LCA10Q71F78 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LCA10Q71F78 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LCA10Q71F78 CHST11-202ENST00000546689 756 ntTSL 2 BASIC11.95□□□□□ -0.5
LCA10Q71F78 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LCA10Q71F78 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LCA10Q71F78 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LCA10Q71F78 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LCA10Q71F78 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LCA10Q71F78 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LCA10Q71F78 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LCA10Q71F78 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC11.95□□□□□ -0.5
LCA10Q71F78 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC11.94□□□□□ -0.5
LCA10Q71F78 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
LCA10Q71F78 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
LCA10Q71F78 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC11.94□□□□□ -0.5
LCA10Q71F78 LINC01971-201ENST00000617888 1048 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms