Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SHC4Q6S5L8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 MIR6722-201ENST00000617286 78 ntBASIC25.36■■□□□ 1.65
SHC4Q6S5L8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHC4Q6S5L8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHC4Q6S5L8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.35■■□□□ 1.65
SHC4Q6S5L8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.35■■□□□ 1.65
SHC4Q6S5L8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SHC4Q6S5L8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SHC4Q6S5L8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHC4Q6S5L8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SHC4Q6S5L8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.35■■□□□ 1.65
SHC4Q6S5L8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHC4Q6S5L8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
SHC4Q6S5L8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.34■■□□□ 1.65
SHC4Q6S5L8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHC4Q6S5L8 BX664725.1-201ENST00000438252 379 ntBASIC25.34■■□□□ 1.65
SHC4Q6S5L8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.34■■□□□ 1.65
SHC4Q6S5L8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SHC4Q6S5L8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.34■■□□□ 1.65
SHC4Q6S5L8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SHC4Q6S5L8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
SHC4Q6S5L8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHC4Q6S5L8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
SHC4Q6S5L8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SHC4Q6S5L8 RARRES2P1-201ENST00000474487 481 ntBASIC25.32■■□□□ 1.64
SHC4Q6S5L8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.32■■□□□ 1.64
SHC4Q6S5L8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHC4Q6S5L8 GUSBP5-202ENST00000510805 1989 ntBASIC25.32■■□□□ 1.64
SHC4Q6S5L8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHC4Q6S5L8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.32■■□□□ 1.64
SHC4Q6S5L8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.32■■□□□ 1.64
SHC4Q6S5L8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SHC4Q6S5L8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.31■■□□□ 1.64
SHC4Q6S5L8 AC144652.1-201ENST00000609974 1624 ntBASIC25.31■■□□□ 1.64
SHC4Q6S5L8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.31■■□□□ 1.64
SHC4Q6S5L8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SHC4Q6S5L8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.31■■□□□ 1.64
SHC4Q6S5L8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SHC4Q6S5L8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SHC4Q6S5L8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SHC4Q6S5L8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHC4Q6S5L8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 AC092028.1-203ENST00000608262 953 ntBASIC25.29■■□□□ 1.64
SHC4Q6S5L8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
SHC4Q6S5L8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 AC005703.6-201ENST00000623265 1329 ntBASIC25.28■■□□□ 1.64
SHC4Q6S5L8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.28■■□□□ 1.64
SHC4Q6S5L8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHC4Q6S5L8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms