Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 MIR4281-201ENST00000580852 62 ntBASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM53Q6P2H8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM53Q6P2H8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM53Q6P2H8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM53Q6P2H8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM53Q6P2H8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM53Q6P2H8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM53Q6P2H8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEM53Q6P2H8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM53Q6P2H8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TMEM53Q6P2H8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM53Q6P2H8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM53Q6P2H8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM53Q6P2H8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM53Q6P2H8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM53Q6P2H8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM53Q6P2H8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM53Q6P2H8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 AC233723.2-201ENST00000623798 2106 ntBASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM53Q6P2H8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 HLA-L-211ENST00000482052 1765 ntBASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM53Q6P2H8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM53Q6P2H8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM53Q6P2H8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM53Q6P2H8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM53Q6P2H8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM53Q6P2H8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM53Q6P2H8 PKD1P6-201ENST00000343738 4769 ntBASIC20.23■□□□□ 0.83
TMEM53Q6P2H8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM53Q6P2H8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM53Q6P2H8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM53Q6P2H8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms