Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.98■□□□□ 0.31
CDPF1Q6NVV7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 SLC6A10P-202ENST00000431994 2058 ntBASIC16.97■□□□□ 0.31
CDPF1Q6NVV7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDPF1Q6NVV7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CDPF1Q6NVV7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDPF1Q6NVV7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.96■□□□□ 0.3
CDPF1Q6NVV7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDPF1Q6NVV7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDPF1Q6NVV7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 AC242852.2-201ENST00000615738 1807 ntBASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDPF1Q6NVV7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDPF1Q6NVV7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDPF1Q6NVV7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDPF1Q6NVV7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms