Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL13A1Q5TAT6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL13A1Q5TAT6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.92■■□□□ 1.74
COL13A1Q5TAT6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.92■■□□□ 1.74
COL13A1Q5TAT6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.92■■□□□ 1.74
COL13A1Q5TAT6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
COL13A1Q5TAT6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
COL13A1Q5TAT6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL13A1Q5TAT6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.91■■□□□ 1.74
COL13A1Q5TAT6 AL445228.2-201ENST00000605589 952 ntBASIC25.91■■□□□ 1.74
COL13A1Q5TAT6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.91■■□□□ 1.74
COL13A1Q5TAT6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
COL13A1Q5TAT6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL13A1Q5TAT6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL13A1Q5TAT6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL13A1Q5TAT6 AF201337.1-201ENST00000520239 748 ntBASIC25.89■■□□□ 1.74
COL13A1Q5TAT6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.89■■□□□ 1.74
COL13A1Q5TAT6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.89■■□□□ 1.74
COL13A1Q5TAT6 FP325331.1-202ENST00000623531 1380 ntBASIC25.89■■□□□ 1.74
COL13A1Q5TAT6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.89■■□□□ 1.73
COL13A1Q5TAT6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL13A1Q5TAT6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.88■■□□□ 1.73
COL13A1Q5TAT6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.87■■□□□ 1.73
COL13A1Q5TAT6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL13A1Q5TAT6 AC006058.3-201ENST00000606217 1069 ntBASIC25.87■■□□□ 1.73
COL13A1Q5TAT6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL13A1Q5TAT6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.87■■□□□ 1.73
COL13A1Q5TAT6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL13A1Q5TAT6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
COL13A1Q5TAT6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
COL13A1Q5TAT6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL13A1Q5TAT6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL13A1Q5TAT6 AC128676.1-201ENST00000454392 318 ntBASIC25.86■■□□□ 1.73
COL13A1Q5TAT6 AC105036.2-201ENST00000569468 176 ntBASIC25.86■■□□□ 1.73
COL13A1Q5TAT6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.86■■□□□ 1.73
COL13A1Q5TAT6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL13A1Q5TAT6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL13A1Q5TAT6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL13A1Q5TAT6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL13A1Q5TAT6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.85■■□□□ 1.73
COL13A1Q5TAT6 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.85■■□□□ 1.73
COL13A1Q5TAT6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
COL13A1Q5TAT6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.85■■□□□ 1.73
COL13A1Q5TAT6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 MIR4758-201ENST00000577688 71 ntBASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 MIR4497-201ENST00000583208 89 ntBASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
COL13A1Q5TAT6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.83■■□□□ 1.73
COL13A1Q5TAT6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.83■■□□□ 1.72
COL13A1Q5TAT6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 ST7-AS1-201ENST00000456775 1889 ntBASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
COL13A1Q5TAT6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.81■■□□□ 1.72
COL13A1Q5TAT6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.81■■□□□ 1.72
COL13A1Q5TAT6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
COL13A1Q5TAT6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.81■■□□□ 1.72
COL13A1Q5TAT6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL13A1Q5TAT6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms