Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPCS3P61009 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPCS3P61009 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPCS3P61009 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPCS3P61009 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPCS3P61009 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPCS3P61009 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPCS3P61009 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPCS3P61009 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.12■□□□□ 0.49
SPCS3P61009 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPCS3P61009 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.12■□□□□ 0.49
SPCS3P61009 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPCS3P61009 AC022616.5-201ENST00000518796 181 ntBASIC18.12■□□□□ 0.49
SPCS3P61009 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPCS3P61009 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPCS3P61009 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPCS3P61009 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPCS3P61009 PKD1P6-201ENST00000343738 4769 ntBASIC18.12■□□□□ 0.49
SPCS3P61009 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPCS3P61009 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPCS3P61009 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.11■□□□□ 0.49
SPCS3P61009 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPCS3P61009 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
SPCS3P61009 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.11■□□□□ 0.49
SPCS3P61009 LINC00526-201ENST00000581067 1875 ntBASIC18.11■□□□□ 0.49
SPCS3P61009 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPCS3P61009 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.11■□□□□ 0.49
SPCS3P61009 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPCS3P61009 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SPCS3P61009 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SPCS3P61009 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SPCS3P61009 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.1■□□□□ 0.49
SPCS3P61009 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.1■□□□□ 0.49
SPCS3P61009 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.1■□□□□ 0.49
SPCS3P61009 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPCS3P61009 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.1■□□□□ 0.49
SPCS3P61009 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.09■□□□□ 0.49
SPCS3P61009 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPCS3P61009 AC127496.7-201ENST00000625110 1798 ntBASIC18.09■□□□□ 0.49
SPCS3P61009 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPCS3P61009 ECEL1P1-201ENST00000373592 1742 ntBASIC18.09■□□□□ 0.49
SPCS3P61009 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.09■□□□□ 0.49
SPCS3P61009 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPCS3P61009 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPCS3P61009 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPCS3P61009 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.09■□□□□ 0.49
SPCS3P61009 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.09■□□□□ 0.49
SPCS3P61009 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SPCS3P61009 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SPCS3P61009 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SPCS3P61009 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SPCS3P61009 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPCS3P61009 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPCS3P61009 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPCS3P61009 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SPCS3P61009 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPCS3P61009 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPCS3P61009 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.08■□□□□ 0.48
SPCS3P61009 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SPCS3P61009 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.08■□□□□ 0.48
SPCS3P61009 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.08■□□□□ 0.48
SPCS3P61009 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPCS3P61009 AC019171.1-201ENST00000601251 1056 ntBASIC18.08■□□□□ 0.48
SPCS3P61009 AC129492.7-201ENST00000622992 756 ntBASIC18.08■□□□□ 0.48
SPCS3P61009 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.08■□□□□ 0.48
SPCS3P61009 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPCS3P61009 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPCS3P61009 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPCS3P61009 ESRRAP2-201ENST00000418437 1549 ntBASIC18.08■□□□□ 0.48
SPCS3P61009 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SPCS3P61009 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPCS3P61009 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
SPCS3P61009 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SPCS3P61009 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPCS3P61009 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPCS3P61009 LINC00565-201ENST00000562710 2331 ntBASIC18.07■□□□□ 0.48
SPCS3P61009 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPCS3P61009 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPCS3P61009 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.07■□□□□ 0.48
SPCS3P61009 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPCS3P61009 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPCS3P61009 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.07■□□□□ 0.48
SPCS3P61009 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SPCS3P61009 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPCS3P61009 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPCS3P61009 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.06■□□□□ 0.48
SPCS3P61009 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPCS3P61009 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.06■□□□□ 0.48
SPCS3P61009 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPCS3P61009 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPCS3P61009 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPCS3P61009 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms