Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
EIF3EP60228 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.12■■□□□ 1.29
EIF3EP60228 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
EIF3EP60228 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
EIF3EP60228 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
EIF3EP60228 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
EIF3EP60228 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.11■■□□□ 1.29
EIF3EP60228 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
EIF3EP60228 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
EIF3EP60228 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
EIF3EP60228 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EIF3EP60228 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EIF3EP60228 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
EIF3EP60228 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EIF3EP60228 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
EIF3EP60228 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.1■■□□□ 1.29
EIF3EP60228 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.1■■□□□ 1.29
EIF3EP60228 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.1■■□□□ 1.29
EIF3EP60228 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EIF3EP60228 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
EIF3EP60228 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EIF3EP60228 AL353803.4-201ENST00000565882 1934 ntBASIC23.1■■□□□ 1.29
EIF3EP60228 AC079834.2-201ENST00000609776 1949 ntBASIC23.1■■□□□ 1.29
EIF3EP60228 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EIF3EP60228 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EIF3EP60228 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.09■■□□□ 1.29
EIF3EP60228 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
EIF3EP60228 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
EIF3EP60228 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
EIF3EP60228 MIR6722-201ENST00000617286 78 ntBASIC23.09■■□□□ 1.29
EIF3EP60228 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.09■■□□□ 1.29
EIF3EP60228 AL117328.2-201ENST00000624617 1940 ntBASIC23.09■■□□□ 1.29
EIF3EP60228 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EIF3EP60228 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EIF3EP60228 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.09■■□□□ 1.29
EIF3EP60228 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
EIF3EP60228 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.08■■□□□ 1.29
EIF3EP60228 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
EIF3EP60228 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.08■■□□□ 1.29
EIF3EP60228 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.08■■□□□ 1.29
EIF3EP60228 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
EIF3EP60228 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
EIF3EP60228 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
EIF3EP60228 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
EIF3EP60228 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
EIF3EP60228 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
EIF3EP60228 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
EIF3EP60228 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
EIF3EP60228 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
EIF3EP60228 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
EIF3EP60228 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.07■■□□□ 1.28
EIF3EP60228 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.07■■□□□ 1.28
EIF3EP60228 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
EIF3EP60228 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
EIF3EP60228 AC005703.6-201ENST00000623265 1329 ntBASIC23.06■■□□□ 1.28
EIF3EP60228 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
EIF3EP60228 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.05■■□□□ 1.28
EIF3EP60228 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.05■■□□□ 1.28
EIF3EP60228 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
EIF3EP60228 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.05■■□□□ 1.28
EIF3EP60228 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
EIF3EP60228 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
EIF3EP60228 RARRES2P1-201ENST00000474487 481 ntBASIC23.04■■□□□ 1.28
EIF3EP60228 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
EIF3EP60228 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.04■■□□□ 1.28
EIF3EP60228 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.03■■□□□ 1.28
EIF3EP60228 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.03■■□□□ 1.28
EIF3EP60228 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
EIF3EP60228 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.03■■□□□ 1.28
EIF3EP60228 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
EIF3EP60228 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
EIF3EP60228 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.03■■□□□ 1.28
EIF3EP60228 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.03■■□□□ 1.28
EIF3EP60228 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
EIF3EP60228 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
EIF3EP60228 AC144652.1-201ENST00000609974 1624 ntBASIC23.03■■□□□ 1.28
EIF3EP60228 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.03■■□□□ 1.28
EIF3EP60228 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
EIF3EP60228 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
EIF3EP60228 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
EIF3EP60228 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
EIF3EP60228 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.02■■□□□ 1.28
EIF3EP60228 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.02■■□□□ 1.28
EIF3EP60228 AC092028.1-203ENST00000608262 953 ntBASIC23.02■■□□□ 1.28
EIF3EP60228 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
EIF3EP60228 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
EIF3EP60228 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
EIF3EP60228 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EIF3EP60228 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
EIF3EP60228 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
EIF3EP60228 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
EIF3EP60228 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
EIF3EP60228 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
EIF3EP60228 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
EIF3EP60228 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
EIF3EP60228 KRT125P-201ENST00000546827 989 ntBASIC23.01■■□□□ 1.27
EIF3EP60228 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EIF3EP60228 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
EIF3EP60228 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.01■■□□□ 1.27
EIF3EP60228 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms