Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDH4P55283 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDH4P55283 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.98■■□□□ 1.27
CDH4P55283 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.97■■□□□ 1.27
CDH4P55283 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDH4P55283 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDH4P55283 AC135279.3-201ENST00000610945 1311 ntBASIC22.97■■□□□ 1.27
CDH4P55283 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDH4P55283 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDH4P55283 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
CDH4P55283 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH4P55283 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH4P55283 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH4P55283 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.96■■□□□ 1.27
CDH4P55283 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CDH4P55283 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.96■■□□□ 1.27
CDH4P55283 AC024257.2-201ENST00000549699 147 ntBASIC22.96■■□□□ 1.27
CDH4P55283 MIR3181-201ENST00000578512 73 ntBASIC22.96■■□□□ 1.27
CDH4P55283 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.96■■□□□ 1.27
CDH4P55283 pRNA.6-201ENST00000610482 90 ntBASIC22.96■■□□□ 1.27
CDH4P55283 pRNA.5-201ENST00000612139 90 ntBASIC22.96■■□□□ 1.27
CDH4P55283 AC011298.3-201ENST00000615796 283 ntBASIC22.96■■□□□ 1.27
CDH4P55283 pRNA.11-201ENST00000618423 90 ntBASIC22.96■■□□□ 1.27
CDH4P55283 pRNA.13-201ENST00000619112 90 ntBASIC22.96■■□□□ 1.27
CDH4P55283 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH4P55283 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.96■■□□□ 1.27
CDH4P55283 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
CDH4P55283 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDH4P55283 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
CDH4P55283 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH4P55283 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CDH4P55283 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDH4P55283 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CDH4P55283 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDH4P55283 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.95■■□□□ 1.26
CDH4P55283 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDH4P55283 AC133561.4-201ENST00000566112 224 ntBASIC22.95■■□□□ 1.26
CDH4P55283 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDH4P55283 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDH4P55283 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDH4P55283 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDH4P55283 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.94■■□□□ 1.26
CDH4P55283 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
CDH4P55283 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.94■■□□□ 1.26
CDH4P55283 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.94■■□□□ 1.26
CDH4P55283 ANOS2P-203ENST00000472227 1816 ntBASIC22.94■■□□□ 1.26
CDH4P55283 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.94■■□□□ 1.26
CDH4P55283 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDH4P55283 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.93■■□□□ 1.26
CDH4P55283 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDH4P55283 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDH4P55283 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CDH4P55283 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDH4P55283 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDH4P55283 MIR638-201ENST00000385237 100 ntBASIC22.93■■□□□ 1.26
CDH4P55283 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.93■■□□□ 1.26
CDH4P55283 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.93■■□□□ 1.26
CDH4P55283 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDH4P55283 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDH4P55283 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.92■■□□□ 1.26
CDH4P55283 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH4P55283 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.92■■□□□ 1.26
CDH4P55283 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.92■■□□□ 1.26
CDH4P55283 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH4P55283 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH4P55283 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.92■■□□□ 1.26
CDH4P55283 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.92■■□□□ 1.26
CDH4P55283 AL499627.2-201ENST00000606283 725 ntBASIC22.92■■□□□ 1.26
CDH4P55283 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH4P55283 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDH4P55283 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDH4P55283 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.91■■□□□ 1.26
CDH4P55283 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDH4P55283 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.91■■□□□ 1.26
CDH4P55283 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.91■■□□□ 1.26
CDH4P55283 AL353803.4-201ENST00000565882 1934 ntBASIC22.91■■□□□ 1.26
CDH4P55283 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.91■■□□□ 1.26
CDH4P55283 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CDH4P55283 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.91■■□□□ 1.26
CDH4P55283 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDH4P55283 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CDH4P55283 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CDH4P55283 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.91■■□□□ 1.26
CDH4P55283 AC092068.2-201ENST00000590491 1708 ntBASIC22.91■■□□□ 1.26
CDH4P55283 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CDH4P55283 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDH4P55283 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.9■■□□□ 1.26
CDH4P55283 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDH4P55283 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDH4P55283 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.9■■□□□ 1.26
CDH4P55283 AC136469.2-201ENST00000623944 1028 ntBASIC22.9■■□□□ 1.26
CDH4P55283 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDH4P55283 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.9■■□□□ 1.26
CDH4P55283 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.9■■□□□ 1.26
CDH4P55283 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH4P55283 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.89■■□□□ 1.25
CDH4P55283 MIR4767-201ENST00000582827 78 ntBASIC22.89■■□□□ 1.25
CDH4P55283 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH4P55283 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH4P55283 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms