Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 AC012354.3-201ENST00000623734 483 ntBASIC21.19■□□□□ 0.98
CDKN2CP42773 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2CP42773 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2CP42773 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDKN2CP42773 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2CP42773 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.19■□□□□ 0.98
CDKN2CP42773 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDKN2CP42773 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2CP42773 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2CP42773 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2CP42773 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.18■□□□□ 0.98
CDKN2CP42773 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDKN2CP42773 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2CP42773 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
CDKN2CP42773 AL353803.4-201ENST00000565882 1934 ntBASIC21.18■□□□□ 0.98
CDKN2CP42773 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2CP42773 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.18■□□□□ 0.98
CDKN2CP42773 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKN2CP42773 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2CP42773 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKN2CP42773 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKN2CP42773 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKN2CP42773 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.17■□□□□ 0.98
CDKN2CP42773 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.17■□□□□ 0.98
CDKN2CP42773 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.17■□□□□ 0.98
CDKN2CP42773 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.17■□□□□ 0.98
CDKN2CP42773 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKN2CP42773 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDKN2CP42773 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDKN2CP42773 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKN2CP42773 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDKN2CP42773 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN2CP42773 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN2CP42773 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN2CP42773 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDKN2CP42773 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN2CP42773 ECEL1P1-201ENST00000373592 1742 ntBASIC21.16■□□□□ 0.98
CDKN2CP42773 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CDKN2CP42773 KRT8P33-201ENST00000508125 1423 ntBASIC21.16■□□□□ 0.98
CDKN2CP42773 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN2CP42773 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.16■□□□□ 0.98
CDKN2CP42773 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN2CP42773 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN2CP42773 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.16■□□□□ 0.98
CDKN2CP42773 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
CDKN2CP42773 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.15■□□□□ 0.98
CDKN2CP42773 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDKN2CP42773 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.15■□□□□ 0.98
CDKN2CP42773 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDKN2CP42773 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKN2CP42773 AC103724.3-201ENST00000564481 992 ntBASIC21.15■□□□□ 0.98
CDKN2CP42773 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.15■□□□□ 0.98
CDKN2CP42773 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.14■□□□□ 0.98
CDKN2CP42773 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDKN2CP42773 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.14■□□□□ 0.98
CDKN2CP42773 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDKN2CP42773 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDKN2CP42773 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.14■□□□□ 0.97
CDKN2CP42773 SNX5-217ENST00000606557 1087 ntBASIC21.14■□□□□ 0.97
CDKN2CP42773 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDKN2CP42773 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.14■□□□□ 0.97
CDKN2CP42773 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDKN2CP42773 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.14■□□□□ 0.97
CDKN2CP42773 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDKN2CP42773 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDKN2CP42773 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDKN2CP42773 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.13■□□□□ 0.97
CDKN2CP42773 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.13■□□□□ 0.97
CDKN2CP42773 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.13■□□□□ 0.97
CDKN2CP42773 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDKN2CP42773 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDKN2CP42773 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.13■□□□□ 0.97
CDKN2CP42773 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDKN2CP42773 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDKN2CP42773 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDKN2CP42773 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDKN2CP42773 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDKN2CP42773 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDKN2CP42773 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDKN2CP42773 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.12■□□□□ 0.97
CDKN2CP42773 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDKN2CP42773 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDKN2CP42773 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDKN2CP42773 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDKN2CP42773 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2CP42773 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2CP42773 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2CP42773 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2CP42773 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2CP42773 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CDKN2CP42773 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2CP42773 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.11■□□□□ 0.97
CDKN2CP42773 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.11■□□□□ 0.97
CDKN2CP42773 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.11■□□□□ 0.97
CDKN2CP42773 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.11■□□□□ 0.97
CDKN2CP42773 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.11■□□□□ 0.97
CDKN2CP42773 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CDKN2CP42773 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2CP42773 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDKN2CP42773 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms