Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX11P35716 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX11P35716 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX11P35716 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
SOX11P35716 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX11P35716 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX11P35716 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX11P35716 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX11P35716 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.72■■□□□ 1.07
SOX11P35716 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX11P35716 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX11P35716 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX11P35716 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.72■■□□□ 1.07
SOX11P35716 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SOX11P35716 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SOX11P35716 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX11P35716 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.71■■□□□ 1.07
SOX11P35716 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SOX11P35716 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.71■■□□□ 1.07
SOX11P35716 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.71■■□□□ 1.07
SOX11P35716 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SOX11P35716 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX11P35716 AC233723.2-201ENST00000623798 2106 ntBASIC21.71■■□□□ 1.07
SOX11P35716 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SOX11P35716 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX11P35716 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOX11P35716 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX11P35716 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SOX11P35716 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX11P35716 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOX11P35716 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX11P35716 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.7■■□□□ 1.06
SOX11P35716 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX11P35716 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SOX11P35716 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.69■■□□□ 1.06
SOX11P35716 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX11P35716 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SOX11P35716 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX11P35716 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX11P35716 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.68■■□□□ 1.06
SOX11P35716 AC008406.3-201ENST00000620001 1374 ntBASIC21.68■■□□□ 1.06
SOX11P35716 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.68■■□□□ 1.06
SOX11P35716 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SOX11P35716 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX11P35716 AL117328.2-201ENST00000624617 1940 ntBASIC21.68■■□□□ 1.06
SOX11P35716 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SOX11P35716 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.68■■□□□ 1.06
SOX11P35716 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX11P35716 C1orf229-201ENST00000623686 2258 ntBASIC21.67■■□□□ 1.06
SOX11P35716 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX11P35716 ANOS2P-203ENST00000472227 1816 ntBASIC21.67■■□□□ 1.06
SOX11P35716 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SOX11P35716 AF131216.4-201ENST00000638924 1588 ntBASIC21.67■■□□□ 1.06
SOX11P35716 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.67■■□□□ 1.06
SOX11P35716 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.67■■□□□ 1.06
SOX11P35716 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX11P35716 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SOX11P35716 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.67■■□□□ 1.06
SOX11P35716 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX11P35716 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.66■■□□□ 1.06
SOX11P35716 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
SOX11P35716 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SOX11P35716 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.65■■□□□ 1.06
SOX11P35716 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SOX11P35716 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX11P35716 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SOX11P35716 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX11P35716 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.65■■□□□ 1.06
SOX11P35716 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.65■■□□□ 1.06
SOX11P35716 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.65■■□□□ 1.06
SOX11P35716 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.65■■□□□ 1.06
SOX11P35716 AC010997.5-201ENST00000609182 354 ntBASIC21.65■■□□□ 1.06
SOX11P35716 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SOX11P35716 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SOX11P35716 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX11P35716 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX11P35716 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.64■■□□□ 1.05
SOX11P35716 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.64■■□□□ 1.05
SOX11P35716 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.64■■□□□ 1.05
SOX11P35716 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms