Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.03■□□□□ 0.96
SOX18P35713 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX18P35713 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX18P35713 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SOX18P35713 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX18P35713 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.02■□□□□ 0.96
SOX18P35713 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.02■□□□□ 0.96
SOX18P35713 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.02■□□□□ 0.96
SOX18P35713 AC009102.2-201ENST00000606772 1639 ntBASIC21.02■□□□□ 0.96
SOX18P35713 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX18P35713 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX18P35713 DUSP8P3-201ENST00000399571 1760 ntBASIC21.02■□□□□ 0.96
SOX18P35713 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SOX18P35713 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX18P35713 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SOX18P35713 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.01■□□□□ 0.95
SOX18P35713 AL117332.1-201ENST00000622628 974 ntBASIC21.01■□□□□ 0.95
SOX18P35713 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX18P35713 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX18P35713 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21■□□□□ 0.95
SOX18P35713 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21■□□□□ 0.95
SOX18P35713 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SOX18P35713 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SOX18P35713 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21■□□□□ 0.95
SOX18P35713 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21■□□□□ 0.95
SOX18P35713 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX18P35713 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21■□□□□ 0.95
SOX18P35713 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21■□□□□ 0.95
SOX18P35713 AC131212.1-201ENST00000613771 668 ntBASIC21■□□□□ 0.95
SOX18P35713 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21■□□□□ 0.95
SOX18P35713 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SOX18P35713 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21■□□□□ 0.95
SOX18P35713 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SOX18P35713 C9orf163-202ENST00000624034 2573 ntBASIC20.99■□□□□ 0.95
SOX18P35713 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.99■□□□□ 0.95
SOX18P35713 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX18P35713 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.99■□□□□ 0.95
SOX18P35713 MIR3621-201ENST00000580529 85 ntBASIC20.99■□□□□ 0.95
SOX18P35713 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.99■□□□□ 0.95
SOX18P35713 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX18P35713 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX18P35713 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX18P35713 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX18P35713 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.98■□□□□ 0.95
SOX18P35713 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX18P35713 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX18P35713 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.98■□□□□ 0.95
SOX18P35713 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX18P35713 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX18P35713 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SOX18P35713 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX18P35713 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX18P35713 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.97■□□□□ 0.95
SOX18P35713 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX18P35713 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
SOX18P35713 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX18P35713 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.96■□□□□ 0.95
SOX18P35713 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.96■□□□□ 0.95
SOX18P35713 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.96■□□□□ 0.95
SOX18P35713 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX18P35713 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.96■□□□□ 0.95
SOX18P35713 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX18P35713 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX18P35713 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SOX18P35713 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX18P35713 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.96■□□□□ 0.95
SOX18P35713 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SOX18P35713 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SOX18P35713 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
SOX18P35713 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SOX18P35713 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.95■□□□□ 0.94
SOX18P35713 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.95■□□□□ 0.94
SOX18P35713 AL512631.2-201ENST00000604634 923 ntBASIC20.95■□□□□ 0.94
SOX18P35713 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.95■□□□□ 0.94
SOX18P35713 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SOX18P35713 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.95■□□□□ 0.94
SOX18P35713 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX18P35713 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX18P35713 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX18P35713 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.94■□□□□ 0.94
SOX18P35713 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SOX18P35713 C17orf82-201ENST00000623772 1530 ntBASIC20.94■□□□□ 0.94
SOX18P35713 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX18P35713 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX18P35713 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.94■□□□□ 0.94
SOX18P35713 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.94■□□□□ 0.94
SOX18P35713 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX18P35713 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOX18P35713 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX18P35713 AC144652.1-201ENST00000609974 1624 ntBASIC20.93■□□□□ 0.94
SOX18P35713 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX18P35713 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOX18P35713 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOX18P35713 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.93■□□□□ 0.94
SOX18P35713 AL353803.4-201ENST00000565882 1934 ntBASIC20.93■□□□□ 0.94
SOX18P35713 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
SOX18P35713 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX18P35713 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX18P35713 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX18P35713 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms