Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CAPN3P20807 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CAPN3P20807 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPN3P20807 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
CAPN3P20807 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN3P20807 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN3P20807 AC127496.7-201ENST00000625110 1798 ntBASIC21.55■■□□□ 1.04
CAPN3P20807 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN3P20807 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPN3P20807 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPN3P20807 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN3P20807 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN3P20807 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN3P20807 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN3P20807 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN3P20807 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN3P20807 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN3P20807 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN3P20807 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN3P20807 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN3P20807 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPN3P20807 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CAPN3P20807 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.54■■□□□ 1.04
CAPN3P20807 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN3P20807 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN3P20807 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN3P20807 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN3P20807 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN3P20807 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CAPN3P20807 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CAPN3P20807 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN3P20807 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN3P20807 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CAPN3P20807 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CAPN3P20807 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN3P20807 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN3P20807 AC103834.1-201ENST00000520383 144 ntBASIC21.52■■□□□ 1.04
CAPN3P20807 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN3P20807 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CAPN3P20807 MIR4508-201ENST00000584178 70 ntBASIC21.52■■□□□ 1.04
CAPN3P20807 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.52■■□□□ 1.04
CAPN3P20807 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN3P20807 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.52■■□□□ 1.04
CAPN3P20807 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN3P20807 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
CAPN3P20807 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CAPN3P20807 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN3P20807 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN3P20807 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN3P20807 AC079630.1-202ENST00000618127 1840 ntBASIC21.51■■□□□ 1.03
CAPN3P20807 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN3P20807 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN3P20807 AL356441.2-201ENST00000443009 864 ntBASIC21.51■■□□□ 1.03
CAPN3P20807 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN3P20807 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.51■■□□□ 1.03
CAPN3P20807 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.51■■□□□ 1.03
CAPN3P20807 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CAPN3P20807 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN3P20807 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CAPN3P20807 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.5■■□□□ 1.03
CAPN3P20807 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPN3P20807 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.5■■□□□ 1.03
CAPN3P20807 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.5■■□□□ 1.03
CAPN3P20807 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.5■■□□□ 1.03
CAPN3P20807 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPN3P20807 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPN3P20807 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.5■■□□□ 1.03
CAPN3P20807 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CAPN3P20807 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CAPN3P20807 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CAPN3P20807 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CAPN3P20807 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CAPN3P20807 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CAPN3P20807 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CAPN3P20807 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CAPN3P20807 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.48■■□□□ 1.03
CAPN3P20807 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN3P20807 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN3P20807 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN3P20807 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN3P20807 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CAPN3P20807 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN3P20807 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.48■■□□□ 1.03
CAPN3P20807 AC242852.2-201ENST00000615738 1807 ntBASIC21.48■■□□□ 1.03
CAPN3P20807 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CAPN3P20807 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN3P20807 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN3P20807 AC137767.1-201ENST00000602918 1920 ntBASIC21.47■■□□□ 1.03
CAPN3P20807 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
CAPN3P20807 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CAPN3P20807 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN3P20807 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN3P20807 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.47■■□□□ 1.03
CAPN3P20807 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.47■■□□□ 1.03
CAPN3P20807 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.47■■□□□ 1.03
CAPN3P20807 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.47■■□□□ 1.03
CAPN3P20807 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.46■■□□□ 1.03
CAPN3P20807 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CAPN3P20807 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN3P20807 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms