Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NID1P14543 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.66■□□□□ 0.9
NID1P14543 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NID1P14543 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NID1P14543 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.65■□□□□ 0.9
NID1P14543 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NID1P14543 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NID1P14543 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NID1P14543 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.65■□□□□ 0.9
NID1P14543 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NID1P14543 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.65■□□□□ 0.9
NID1P14543 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.65■□□□□ 0.9
NID1P14543 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.65■□□□□ 0.9
NID1P14543 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NID1P14543 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
NID1P14543 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NID1P14543 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.64■□□□□ 0.9
NID1P14543 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NID1P14543 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.64■□□□□ 0.89
NID1P14543 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NID1P14543 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NID1P14543 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NID1P14543 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NID1P14543 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NID1P14543 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NID1P14543 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NID1P14543 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.63■□□□□ 0.89
NID1P14543 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NID1P14543 AL353803.4-201ENST00000565882 1934 ntBASIC20.63■□□□□ 0.89
NID1P14543 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.63■□□□□ 0.89
NID1P14543 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NID1P14543 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NID1P14543 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NID1P14543 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.63■□□□□ 0.89
NID1P14543 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.63■□□□□ 0.89
NID1P14543 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.63■□□□□ 0.89
NID1P14543 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NID1P14543 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NID1P14543 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NID1P14543 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.62■□□□□ 0.89
NID1P14543 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NID1P14543 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NID1P14543 AC144652.1-201ENST00000609974 1624 ntBASIC20.62■□□□□ 0.89
NID1P14543 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NID1P14543 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.61■□□□□ 0.89
NID1P14543 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NID1P14543 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.61■□□□□ 0.89
NID1P14543 MTDHP2-201ENST00000601468 714 ntBASIC20.61■□□□□ 0.89
NID1P14543 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NID1P14543 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NID1P14543 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
NID1P14543 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.61■□□□□ 0.89
NID1P14543 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
NID1P14543 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.61■□□□□ 0.89
NID1P14543 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NID1P14543 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NID1P14543 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NID1P14543 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NID1P14543 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NID1P14543 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.6■□□□□ 0.89
NID1P14543 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
NID1P14543 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NID1P14543 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NID1P14543 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.6■□□□□ 0.89
NID1P14543 C1orf229-201ENST00000623686 2258 ntBASIC20.6■□□□□ 0.89
NID1P14543 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NID1P14543 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NID1P14543 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NID1P14543 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NID1P14543 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NID1P14543 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.59■□□□□ 0.89
NID1P14543 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.59■□□□□ 0.89
NID1P14543 AL356441.2-201ENST00000443009 864 ntBASIC20.59■□□□□ 0.89
NID1P14543 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.59■□□□□ 0.89
NID1P14543 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NID1P14543 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NID1P14543 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NID1P14543 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NID1P14543 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NID1P14543 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.58■□□□□ 0.89
NID1P14543 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
NID1P14543 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.58■□□□□ 0.89
NID1P14543 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.58■□□□□ 0.89
NID1P14543 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NID1P14543 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NID1P14543 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.58■□□□□ 0.88
NID1P14543 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NID1P14543 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NID1P14543 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.57■□□□□ 0.88
NID1P14543 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms