Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 CNS1YBR155W 1158 nt4.72□□□□□ -1.65
TY2A-LR1P0C2J4 ARN1YHL040C 1884 nt4.72□□□□□ -1.65
TY2A-LR1P0C2J4 OCA5YHL029C 2040 nt4.72□□□□□ -1.65
TY2A-LR1P0C2J4 BRE2YLR015W 1518 nt4.72□□□□□ -1.65
TY2A-LR1P0C2J4 ALD3YMR169C 1521 nt4.72□□□□□ -1.65
TY2A-LR1P0C2J4 ALD2YMR170C 1521 nt4.72□□□□□ -1.65
TY2A-LR1P0C2J4 SRO9YCL037C 1305 nt4.72□□□□□ -1.65
TY2A-LR1P0C2J4 HPC2YBR215W 1878 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 MGS1YNL218W 1764 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 YDL012CYDL012C 324 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 GCV1YDR019C 1203 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 FAU1YER183C 636 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 THI5YFL058W 1023 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 MF(ALPHA)2YGL089C 363 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 PUS6YGR169C 1215 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 GON7YJL184W 372 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 CPR6YLR216C 1116 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 POL12YBL035C 2118 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 THI12YNL332W 1023 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 CKB2YOR039W 777 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 RPN8YOR261C 1017 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 MMT1YMR177W 1533 nt4.71□□□□□ -1.66
TY2A-LR1P0C2J4 GPB1YOR371C 2694 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 YGL193CYGL193C 312 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 YHR112CYHR112C 1137 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 DCG1YIR030C 735 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 ERD2YBL040C 660 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 YMR315WYMR315W 1050 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 YBL094CYBL094C 333 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 DBF4YDR052C 2115 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 FRE3YOR381W 2136 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 FRS1YLR060W 1788 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 KCC4YCL024W 3114 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 KAR1YNL188W 1302 nt4.7□□□□□ -1.66
TY2A-LR1P0C2J4 SLC1YDL052C 912 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 DAS2YDR020C 699 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 YER067C-AYER067C-A 324 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 YGR168CYGR168C 1131 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 PEX21YGR239C 867 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 PHO86YJL117W 936 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 YAL044W-AYAL044W-A 333 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 YKL177WYKL177W 339 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 JLP1YLL057C 1239 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 TRM10YOL093W 882 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 TFB6YOR352W 1032 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 MET31YPL038W 534 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 CAM1YPL048W 1248 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 COX11YPL132W 903 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 YBR089WYBR089W 600 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 VHS2YIL135C 1311 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 SOF1YLL011W 1470 nt4.69□□□□□ -1.66
TY2A-LR1P0C2J4 ROT2YBR229C 2865 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 TUB2YFL037W 1374 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 TUP1YCR084C 2142 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 MHF2YDL160C-A 243 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 AAD4YDL243C 990 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 TRS23YDR246W 660 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 YHB1YGR234W 1200 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 PNP1YLR209C 936 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 YMR245WYMR245W 621 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 DCI1YOR180C 816 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 PTM1YKL039W 1572 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 SED4YCR067C 3198 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 LEU1YGL009C 2340 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 ECM32YER176W 3366 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 UGA2YBR006W 1494 nt4.68□□□□□ -1.66
TY2A-LR1P0C2J4 FAP1YNL023C 2898 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 RKM2YDR198C 1440 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 YCR016WYCR016W 873 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 YGR149WYGR149W 1299 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 TRX2YGR209C 315 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 YLR125WYLR125W 411 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 YML090WYML090W 387 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 MDY2YOL111C 639 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 CUE5YOR042W 1236 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 VPS21YOR089C 633 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 ALG11YNL048W 1647 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 FUM1YPL262W 1467 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 MCH4YOL119C 1506 nt4.67□□□□□ -1.66
TY2A-LR1P0C2J4 HIS4YCL030C 2400 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 PMT4YJR143C 2289 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 TCA17YEL048C 459 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 VMA22YHR060W 546 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 GMH1YKR030W 822 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 NSE1YLR007W 1011 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 YLR198CYLR198C 360 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 RUF20RUF20 443 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 ZPS1YOL154W 750 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 TMA16YOR252W 537 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 snR19snR19 568 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 HSP82YPL240C 2130 nt4.66□□□□□ -1.66
TY2A-LR1P0C2J4 BUD22YMR014W 1560 nt4.65□□□□□ -1.66
TY2A-LR1P0C2J4 RSC6YCR052W 1452 nt4.65□□□□□ -1.66
TY2A-LR1P0C2J4 MMT2YPL224C 1455 nt4.65□□□□□ -1.66
TY2A-LR1P0C2J4 HIS6YIL020C 786 nt4.65□□□□□ -1.67
TY2A-LR1P0C2J4 QCR2YPR191W 1107 nt4.65□□□□□ -1.67
TY2A-LR1P0C2J4 UBX7YBR273C 1311 nt4.65□□□□□ -1.67
TY2A-LR1P0C2J4 RTK1YDL025C 1863 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 SER33YIL074C 1410 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 SUL2YLR092W 2682 nt4.64□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms