Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.68■■□□□ 1.22
MMP2P08253 AL353803.4-201ENST00000565882 1934 ntBASIC22.68■■□□□ 1.22
MMP2P08253 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP2P08253 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP2P08253 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MMP2P08253 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP2P08253 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.67■■□□□ 1.22
MMP2P08253 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP2P08253 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.67■■□□□ 1.22
MMP2P08253 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
MMP2P08253 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.67■■□□□ 1.22
MMP2P08253 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP2P08253 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.67■■□□□ 1.22
MMP2P08253 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
MMP2P08253 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
MMP2P08253 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.67■■□□□ 1.22
MMP2P08253 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.67■■□□□ 1.22
MMP2P08253 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP2P08253 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP2P08253 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP2P08253 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP2P08253 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP2P08253 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP2P08253 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP2P08253 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP2P08253 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP2P08253 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.66■■□□□ 1.22
MMP2P08253 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP2P08253 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP2P08253 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.65■■□□□ 1.22
MMP2P08253 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.65■■□□□ 1.22
MMP2P08253 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.65■■□□□ 1.22
MMP2P08253 C9orf163-202ENST00000624034 2573 ntBASIC22.64■■□□□ 1.22
MMP2P08253 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP2P08253 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP2P08253 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.64■■□□□ 1.21
MMP2P08253 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.64■■□□□ 1.21
MMP2P08253 MIR4466-201ENST00000606121 54 ntBASIC22.64■■□□□ 1.21
MMP2P08253 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.64■■□□□ 1.21
MMP2P08253 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
MMP2P08253 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP2P08253 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.64■■□□□ 1.21
MMP2P08253 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.63■■□□□ 1.21
MMP2P08253 FP325331.1-202ENST00000623531 1380 ntBASIC22.63■■□□□ 1.21
MMP2P08253 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP2P08253 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
MMP2P08253 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.63■■□□□ 1.21
MMP2P08253 AC131281.2-201ENST00000520478 145 ntBASIC22.63■■□□□ 1.21
MMP2P08253 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP2P08253 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP2P08253 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
MMP2P08253 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP2P08253 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.62■■□□□ 1.21
MMP2P08253 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.62■■□□□ 1.21
MMP2P08253 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.62■■□□□ 1.21
MMP2P08253 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP2P08253 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MMP2P08253 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP2P08253 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP2P08253 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP2P08253 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.62■■□□□ 1.21
MMP2P08253 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP2P08253 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.62■■□□□ 1.21
MMP2P08253 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
MMP2P08253 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MMP2P08253 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.62■■□□□ 1.21
MMP2P08253 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.62■■□□□ 1.21
MMP2P08253 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MMP2P08253 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MMP2P08253 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.61■■□□□ 1.21
MMP2P08253 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MMP2P08253 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.61■■□□□ 1.21
MMP2P08253 AC131212.1-201ENST00000613771 668 ntBASIC22.61■■□□□ 1.21
MMP2P08253 LINC01529-204ENST00000636474 1715 ntBASIC22.61■■□□□ 1.21
MMP2P08253 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MMP2P08253 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MMP2P08253 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
MMP2P08253 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
MMP2P08253 DUX4L4-201ENST00000566884 1269 ntBASIC22.6■■□□□ 1.21
MMP2P08253 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.6■■□□□ 1.21
MMP2P08253 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.6■■□□□ 1.21
MMP2P08253 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.6■■□□□ 1.21
MMP2P08253 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP2P08253 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP2P08253 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.6■■□□□ 1.21
MMP2P08253 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
MMP2P08253 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
MMP2P08253 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP2P08253 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP2P08253 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.59■■□□□ 1.21
MMP2P08253 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
MMP2P08253 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP2P08253 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP2P08253 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MMP2P08253 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MMP2P08253 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MMP2P08253 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.58■■□□□ 1.21
MMP2P08253 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MMP2P08253 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.58■■□□□ 1.21
MMP2P08253 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms