Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOMM40O96008 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOMM40O96008 AC012354.3-201ENST00000623734 483 ntBASIC17.47■□□□□ 0.39
TOMM40O96008 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.47■□□□□ 0.39
TOMM40O96008 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOMM40O96008 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOMM40O96008 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOMM40O96008 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOMM40O96008 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.46■□□□□ 0.39
TOMM40O96008 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOMM40O96008 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TOMM40O96008 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.46■□□□□ 0.39
TOMM40O96008 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TOMM40O96008 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.46■□□□□ 0.39
TOMM40O96008 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOMM40O96008 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TOMM40O96008 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TOMM40O96008 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TOMM40O96008 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.45■□□□□ 0.38
TOMM40O96008 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOMM40O96008 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.45■□□□□ 0.38
TOMM40O96008 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.45■□□□□ 0.38
TOMM40O96008 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.45■□□□□ 0.38
TOMM40O96008 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOMM40O96008 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.44■□□□□ 0.38
TOMM40O96008 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.44■□□□□ 0.38
TOMM40O96008 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.44■□□□□ 0.38
TOMM40O96008 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TOMM40O96008 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 AC079630.1-202ENST00000618127 1840 ntBASIC17.44■□□□□ 0.38
TOMM40O96008 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.44■□□□□ 0.38
TOMM40O96008 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.44■□□□□ 0.38
TOMM40O96008 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.44■□□□□ 0.38
TOMM40O96008 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOMM40O96008 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.43■□□□□ 0.38
TOMM40O96008 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOMM40O96008 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TOMM40O96008 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOMM40O96008 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.43■□□□□ 0.38
TOMM40O96008 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TOMM40O96008 C1orf229-201ENST00000623686 2258 ntBASIC17.43■□□□□ 0.38
TOMM40O96008 EP400NL-214ENST00000641289 2402 ntBASIC17.43■□□□□ 0.38
TOMM40O96008 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.43■□□□□ 0.38
TOMM40O96008 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.43■□□□□ 0.38
TOMM40O96008 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TOMM40O96008 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOMM40O96008 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TOMM40O96008 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.42■□□□□ 0.38
TOMM40O96008 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TOMM40O96008 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
TOMM40O96008 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.42■□□□□ 0.38
TOMM40O96008 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.42■□□□□ 0.38
TOMM40O96008 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.42■□□□□ 0.38
TOMM40O96008 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TOMM40O96008 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TOMM40O96008 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOMM40O96008 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.42■□□□□ 0.38
TOMM40O96008 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TOMM40O96008 LINC00565-201ENST00000562710 2331 ntBASIC17.41■□□□□ 0.38
TOMM40O96008 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TOMM40O96008 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.41■□□□□ 0.38
TOMM40O96008 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.41■□□□□ 0.38
TOMM40O96008 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.41■□□□□ 0.38
TOMM40O96008 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOMM40O96008 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.41■□□□□ 0.38
TOMM40O96008 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOMM40O96008 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.4■□□□□ 0.38
TOMM40O96008 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms