Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC3O95833 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC3O95833 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC3O95833 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLIC3O95833 AC073130.3-201ENST00000624389 2278 ntBASIC20.68■□□□□ 0.9
CLIC3O95833 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC3O95833 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.68■□□□□ 0.9
CLIC3O95833 RP9P-202ENST00000450133 1212 ntBASIC20.68■□□□□ 0.9
CLIC3O95833 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.68■□□□□ 0.9
CLIC3O95833 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.68■□□□□ 0.9
CLIC3O95833 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC3O95833 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC3O95833 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC3O95833 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CLIC3O95833 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIC3O95833 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC3O95833 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLIC3O95833 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC3O95833 AC093536.1-201ENST00000569153 554 ntBASIC20.67■□□□□ 0.9
CLIC3O95833 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC3O95833 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC3O95833 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIC3O95833 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC3O95833 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIC3O95833 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC3O95833 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC3O95833 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC3O95833 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC3O95833 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC3O95833 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLIC3O95833 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC3O95833 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC3O95833 AC079630.1-202ENST00000618127 1840 ntBASIC20.66■□□□□ 0.9
CLIC3O95833 AC080038.3-201ENST00000623346 1952 ntBASIC20.66■□□□□ 0.9
CLIC3O95833 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLIC3O95833 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIC3O95833 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLIC3O95833 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIC3O95833 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIC3O95833 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIC3O95833 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 ZNRF2P2-203ENST00000454624 420 ntBASIC20.65■□□□□ 0.9
CLIC3O95833 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.65■□□□□ 0.9
CLIC3O95833 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIC3O95833 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CLIC3O95833 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC3O95833 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIC3O95833 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLIC3O95833 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLIC3O95833 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLIC3O95833 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.64■□□□□ 0.9
CLIC3O95833 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLIC3O95833 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CLIC3O95833 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
CLIC3O95833 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC3O95833 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.64■□□□□ 0.89
CLIC3O95833 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC3O95833 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.64■□□□□ 0.89
CLIC3O95833 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC3O95833 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLIC3O95833 AC090877.2-201ENST00000558441 1738 ntBASIC20.64■□□□□ 0.89
CLIC3O95833 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.63■□□□□ 0.89
CLIC3O95833 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIC3O95833 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC3O95833 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CLIC3O95833 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC3O95833 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC3O95833 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.63■□□□□ 0.89
CLIC3O95833 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC3O95833 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC3O95833 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC3O95833 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC3O95833 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLIC3O95833 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CLIC3O95833 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLIC3O95833 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC3O95833 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.62■□□□□ 0.89
CLIC3O95833 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.62■□□□□ 0.89
CLIC3O95833 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLIC3O95833 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC3O95833 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLIC3O95833 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIC3O95833 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms