Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 AC131274.2-201ENST00000580697 1507 ntBASIC23■■□□□ 1.27
RPP40O75818 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23■■□□□ 1.27
RPP40O75818 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPP40O75818 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPP40O75818 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.99■■□□□ 1.27
RPP40O75818 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RPP40O75818 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPP40O75818 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPP40O75818 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPP40O75818 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.98■■□□□ 1.27
RPP40O75818 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.98■■□□□ 1.27
RPP40O75818 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.98■■□□□ 1.27
RPP40O75818 AC090192.1-201ENST00000517740 490 ntBASIC22.98■■□□□ 1.27
RPP40O75818 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.98■■□□□ 1.27
RPP40O75818 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.98■■□□□ 1.27
RPP40O75818 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPP40O75818 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPP40O75818 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPP40O75818 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPP40O75818 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.97■■□□□ 1.27
RPP40O75818 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPP40O75818 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.97■■□□□ 1.27
RPP40O75818 RARRES2P11-201ENST00000635158 484 ntBASIC22.97■■□□□ 1.27
RPP40O75818 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RPP40O75818 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPP40O75818 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPP40O75818 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPP40O75818 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.96■■□□□ 1.27
RPP40O75818 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPP40O75818 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.96■■□□□ 1.27
RPP40O75818 AC136469.2-201ENST00000623944 1028 ntBASIC22.96■■□□□ 1.27
RPP40O75818 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.96■■□□□ 1.27
RPP40O75818 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPP40O75818 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPP40O75818 AC009102.2-201ENST00000606772 1639 ntBASIC22.96■■□□□ 1.27
RPP40O75818 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPP40O75818 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPP40O75818 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.96■■□□□ 1.27
RPP40O75818 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPP40O75818 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPP40O75818 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.95■■□□□ 1.26
RPP40O75818 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.95■■□□□ 1.26
RPP40O75818 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.95■■□□□ 1.26
RPP40O75818 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPP40O75818 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RPP40O75818 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPP40O75818 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPP40O75818 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPP40O75818 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.94■■□□□ 1.26
RPP40O75818 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.94■■□□□ 1.26
RPP40O75818 AC034268.1-201ENST00000441047 882 ntBASIC22.94■■□□□ 1.26
RPP40O75818 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RPP40O75818 AC233992.3-201ENST00000607491 485 ntBASIC22.94■■□□□ 1.26
RPP40O75818 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RPP40O75818 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.94■■□□□ 1.26
RPP40O75818 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.94■■□□□ 1.26
RPP40O75818 AC241377.3-202ENST00000626088 1088 ntBASIC22.94■■□□□ 1.26
RPP40O75818 AC241585.3-202ENST00000628937 1088 ntBASIC22.94■■□□□ 1.26
RPP40O75818 AC245100.8-202ENST00000629247 1058 ntBASIC22.94■■□□□ 1.26
RPP40O75818 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPP40O75818 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
RPP40O75818 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.93■■□□□ 1.26
RPP40O75818 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.93■■□□□ 1.26
RPP40O75818 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.93■■□□□ 1.26
RPP40O75818 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.93■■□□□ 1.26
RPP40O75818 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.93■■□□□ 1.26
RPP40O75818 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RPP40O75818 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPP40O75818 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPP40O75818 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP40O75818 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP40O75818 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
RPP40O75818 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP40O75818 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP40O75818 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP40O75818 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP40O75818 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP40O75818 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPP40O75818 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.91■■□□□ 1.26
RPP40O75818 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.91■■□□□ 1.26
RPP40O75818 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.91■■□□□ 1.26
RPP40O75818 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.91■■□□□ 1.26
RPP40O75818 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPP40O75818 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.91■■□□□ 1.26
RPP40O75818 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPP40O75818 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPP40O75818 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPP40O75818 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.91■■□□□ 1.26
RPP40O75818 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPP40O75818 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RPP40O75818 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPP40O75818 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms