Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFPL1O75677 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
RFPL1O75677 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RFPL1O75677 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.51■■□□□ 1.19
RFPL1O75677 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFPL1O75677 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFPL1O75677 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFPL1O75677 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFPL1O75677 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RFPL1O75677 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFPL1O75677 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFPL1O75677 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFPL1O75677 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RFPL1O75677 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFPL1O75677 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFPL1O75677 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.5■■□□□ 1.19
RFPL1O75677 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.5■■□□□ 1.19
RFPL1O75677 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFPL1O75677 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
RFPL1O75677 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RFPL1O75677 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.5■■□□□ 1.19
RFPL1O75677 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.5■■□□□ 1.19
RFPL1O75677 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFPL1O75677 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RFPL1O75677 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RFPL1O75677 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFPL1O75677 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.49■■□□□ 1.19
RFPL1O75677 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
RFPL1O75677 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
RFPL1O75677 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFPL1O75677 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.49■■□□□ 1.19
RFPL1O75677 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RFPL1O75677 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RFPL1O75677 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RFPL1O75677 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RFPL1O75677 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RFPL1O75677 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RFPL1O75677 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RFPL1O75677 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.48■■□□□ 1.19
RFPL1O75677 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.48■■□□□ 1.19
RFPL1O75677 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.48■■□□□ 1.19
RFPL1O75677 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RFPL1O75677 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RFPL1O75677 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.48■■□□□ 1.19
RFPL1O75677 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL1O75677 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RFPL1O75677 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL1O75677 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL1O75677 KRT125P-201ENST00000546827 989 ntBASIC22.47■■□□□ 1.19
RFPL1O75677 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL1O75677 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RFPL1O75677 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL1O75677 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL1O75677 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFPL1O75677 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.46■■□□□ 1.19
RFPL1O75677 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFPL1O75677 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFPL1O75677 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFPL1O75677 AC079630.1-202ENST00000618127 1840 ntBASIC22.46■■□□□ 1.19
RFPL1O75677 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.46■■□□□ 1.19
RFPL1O75677 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RFPL1O75677 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.46■■□□□ 1.19
RFPL1O75677 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RFPL1O75677 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RFPL1O75677 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.46■■□□□ 1.19
RFPL1O75677 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.46■■□□□ 1.19
RFPL1O75677 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFPL1O75677 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RFPL1O75677 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RFPL1O75677 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RFPL1O75677 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFPL1O75677 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFPL1O75677 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFPL1O75677 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RFPL1O75677 AC022616.5-201ENST00000518796 181 ntBASIC22.45■■□□□ 1.18
RFPL1O75677 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.45■■□□□ 1.18
RFPL1O75677 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.45■■□□□ 1.18
RFPL1O75677 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.45■■□□□ 1.18
RFPL1O75677 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.45■■□□□ 1.18
RFPL1O75677 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RFPL1O75677 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
RFPL1O75677 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFPL1O75677 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFPL1O75677 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.44■■□□□ 1.18
RFPL1O75677 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.44■■□□□ 1.18
RFPL1O75677 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.44■■□□□ 1.18
RFPL1O75677 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFPL1O75677 AC127496.7-201ENST00000625110 1798 ntBASIC22.44■■□□□ 1.18
RFPL1O75677 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.44■■□□□ 1.18
RFPL1O75677 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFPL1O75677 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFPL1O75677 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFPL1O75677 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFPL1O75677 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFPL1O75677 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RFPL1O75677 AC008406.3-201ENST00000620001 1374 ntBASIC22.43■■□□□ 1.18
RFPL1O75677 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFPL1O75677 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RFPL1O75677 BX664725.1-201ENST00000438252 379 ntBASIC22.43■■□□□ 1.18
RFPL1O75677 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms