Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC241585.3-202ENST00000628937 1088 ntBASIC21.55■■□□□ 1.04
SNRNP200O75643 AC245100.8-202ENST00000629247 1058 ntBASIC21.55■■□□□ 1.04
SNRNP200O75643 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRNP200O75643 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRNP200O75643 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SNRNP200O75643 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNRNP200O75643 AL031432.3-201ENST00000607698 485 ntBASIC21.54■■□□□ 1.04
SNRNP200O75643 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRNP200O75643 AC092068.2-201ENST00000590491 1708 ntBASIC21.54■■□□□ 1.04
SNRNP200O75643 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRNP200O75643 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRNP200O75643 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.53■■□□□ 1.04
SNRNP200O75643 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRNP200O75643 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
SNRNP200O75643 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRNP200O75643 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNRNP200O75643 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRNP200O75643 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRNP200O75643 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRNP200O75643 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNRNP200O75643 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNRNP200O75643 SLC47A1P1-202ENST00000449666 945 ntBASIC21.52■■□□□ 1.04
SNRNP200O75643 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.52■■□□□ 1.04
SNRNP200O75643 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.52■■□□□ 1.04
SNRNP200O75643 AC011298.3-201ENST00000615796 283 ntBASIC21.52■■□□□ 1.04
SNRNP200O75643 SYT6-210ENST00000641643 1587 ntBASIC21.52■■□□□ 1.04
SNRNP200O75643 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNRNP200O75643 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNRNP200O75643 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNRNP200O75643 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SNRNP200O75643 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.52■■□□□ 1.03
SNRNP200O75643 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
SNRNP200O75643 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
SNRNP200O75643 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNRNP200O75643 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNRNP200O75643 UNC93B3-201ENST00000308076 687 ntBASIC21.51■■□□□ 1.03
SNRNP200O75643 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.51■■□□□ 1.03
SNRNP200O75643 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.51■■□□□ 1.03
SNRNP200O75643 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.51■■□□□ 1.03
SNRNP200O75643 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.51■■□□□ 1.03
SNRNP200O75643 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNRNP200O75643 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNRNP200O75643 FP325331.1-202ENST00000623531 1380 ntBASIC21.51■■□□□ 1.03
SNRNP200O75643 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNRNP200O75643 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.51■■□□□ 1.03
SNRNP200O75643 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SNRNP200O75643 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.51■■□□□ 1.03
SNRNP200O75643 AC135279.3-201ENST00000610945 1311 ntBASIC21.51■■□□□ 1.03
SNRNP200O75643 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.51■■□□□ 1.03
SNRNP200O75643 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNRNP200O75643 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SNRNP200O75643 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.5■■□□□ 1.03
SNRNP200O75643 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.5■■□□□ 1.03
SNRNP200O75643 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP200O75643 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.49■■□□□ 1.03
SNRNP200O75643 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNRNP200O75643 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNRNP200O75643 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.49■■□□□ 1.03
SNRNP200O75643 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNRNP200O75643 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.49■■□□□ 1.03
SNRNP200O75643 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNRNP200O75643 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNRNP200O75643 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNRNP200O75643 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.49■■□□□ 1.03
SNRNP200O75643 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.49■■□□□ 1.03
SNRNP200O75643 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SNRNP200O75643 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNRNP200O75643 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNRNP200O75643 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNRNP200O75643 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SNRNP200O75643 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNRNP200O75643 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNRNP200O75643 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SNRNP200O75643 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNRNP200O75643 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SNRNP200O75643 AL139246.5-201ENST00000606645 996 ntBASIC21.47■■□□□ 1.03
SNRNP200O75643 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SNRNP200O75643 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP200O75643 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP200O75643 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP200O75643 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP200O75643 SRD5A1P1-201ENST00000442297 786 ntBASIC21.47■■□□□ 1.03
SNRNP200O75643 AP001330.3-201ENST00000520123 633 ntBASIC21.47■■□□□ 1.03
SNRNP200O75643 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP200O75643 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP200O75643 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.47■■□□□ 1.03
SNRNP200O75643 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP200O75643 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.46■■□□□ 1.03
SNRNP200O75643 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.46■■□□□ 1.03
SNRNP200O75643 ANOS2P-203ENST00000472227 1816 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms