Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
ABCC4O15439 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCC4O15439 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ABCC4O15439 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.68■■■□□ 2.18
ABCC4O15439 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCC4O15439 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCC4O15439 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.68■■■□□ 2.18
ABCC4O15439 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ABCC4O15439 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
ABCC4O15439 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ABCC4O15439 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.67■■■□□ 2.18
ABCC4O15439 AC092068.2-201ENST00000590491 1708 ntBASIC28.66■■■□□ 2.18
ABCC4O15439 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ABCC4O15439 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.66■■■□□ 2.18
ABCC4O15439 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCC4O15439 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCC4O15439 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.66■■■□□ 2.18
ABCC4O15439 MIR939-201ENST00000401314 82 ntBASIC28.66■■■□□ 2.18
ABCC4O15439 AP001330.3-201ENST00000520123 633 ntBASIC28.66■■■□□ 2.18
ABCC4O15439 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ABCC4O15439 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCC4O15439 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCC4O15439 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.65■■■□□ 2.18
ABCC4O15439 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.65■■■□□ 2.18
ABCC4O15439 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.65■■■□□ 2.18
ABCC4O15439 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCC4O15439 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCC4O15439 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.65■■■□□ 2.18
ABCC4O15439 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
ABCC4O15439 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCC4O15439 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
ABCC4O15439 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
ABCC4O15439 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ABCC4O15439 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
ABCC4O15439 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
ABCC4O15439 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ABCC4O15439 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
ABCC4O15439 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ABCC4O15439 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
ABCC4O15439 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
ABCC4O15439 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.64■■■□□ 2.17
ABCC4O15439 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
ABCC4O15439 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.64■■■□□ 2.17
ABCC4O15439 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ABCC4O15439 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ABCC4O15439 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ABCC4O15439 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ABCC4O15439 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ABCC4O15439 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ABCC4O15439 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ABCC4O15439 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
ABCC4O15439 DUX4L19-201ENST00000557448 1267 ntBASIC28.63■■■□□ 2.17
ABCC4O15439 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.63■■■□□ 2.17
ABCC4O15439 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
ABCC4O15439 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.63■■■□□ 2.17
ABCC4O15439 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ABCC4O15439 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.62■■■□□ 2.17
ABCC4O15439 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.62■■■□□ 2.17
ABCC4O15439 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCC4O15439 AC092666.2-201ENST00000613287 246 ntBASIC28.62■■■□□ 2.17
ABCC4O15439 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCC4O15439 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCC4O15439 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCC4O15439 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCC4O15439 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCC4O15439 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
ABCC4O15439 AC079630.1-202ENST00000618127 1840 ntBASIC28.6■■■□□ 2.17
ABCC4O15439 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCC4O15439 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.6■■■□□ 2.17
ABCC4O15439 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCC4O15439 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCC4O15439 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.6■■■□□ 2.17
ABCC4O15439 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
ABCC4O15439 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ABCC4O15439 MIR4767-201ENST00000582827 78 ntBASIC28.6■■■□□ 2.17
ABCC4O15439 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCC4O15439 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCC4O15439 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCC4O15439 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCC4O15439 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCC4O15439 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCC4O15439 AC009102.2-201ENST00000606772 1639 ntBASIC28.59■■■□□ 2.17
ABCC4O15439 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCC4O15439 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCC4O15439 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.59■■■□□ 2.17
ABCC4O15439 SYT6-210ENST00000641643 1587 ntBASIC28.59■■■□□ 2.17
ABCC4O15439 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.59■■■□□ 2.17
ABCC4O15439 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.58■■■□□ 2.17
ABCC4O15439 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCC4O15439 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCC4O15439 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCC4O15439 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms