Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM1O00151 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM1O00151 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.23■□□□□ 0.99
PDLIM1O00151 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM1O00151 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PDLIM1O00151 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PDLIM1O00151 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM1O00151 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM1O00151 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM1O00151 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM1O00151 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM1O00151 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.22■□□□□ 0.99
PDLIM1O00151 AL033527.3-201ENST00000566366 1196 ntBASIC21.22■□□□□ 0.99
PDLIM1O00151 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDLIM1O00151 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
PDLIM1O00151 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM1O00151 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.21■□□□□ 0.99
PDLIM1O00151 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.21■□□□□ 0.99
PDLIM1O00151 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.21■□□□□ 0.99
PDLIM1O00151 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.21■□□□□ 0.99
PDLIM1O00151 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM1O00151 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM1O00151 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM1O00151 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.21■□□□□ 0.99
PDLIM1O00151 MIR6765-201ENST00000614092 87 ntBASIC21.21■□□□□ 0.99
PDLIM1O00151 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM1O00151 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.21■□□□□ 0.99
PDLIM1O00151 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM1O00151 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM1O00151 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.21■□□□□ 0.99
PDLIM1O00151 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
PDLIM1O00151 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.2■□□□□ 0.98
PDLIM1O00151 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
PDLIM1O00151 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM1O00151 AC018755.3-202ENST00000596210 929 ntBASIC21.2■□□□□ 0.98
PDLIM1O00151 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM1O00151 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.2■□□□□ 0.98
PDLIM1O00151 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM1O00151 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PDLIM1O00151 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM1O00151 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDLIM1O00151 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM1O00151 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM1O00151 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM1O00151 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM1O00151 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM1O00151 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM1O00151 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.19■□□□□ 0.98
PDLIM1O00151 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM1O00151 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM1O00151 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM1O00151 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM1O00151 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM1O00151 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM1O00151 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM1O00151 DUX4L18-201ENST00000553347 1267 ntBASIC21.18■□□□□ 0.98
PDLIM1O00151 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PDLIM1O00151 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM1O00151 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM1O00151 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM1O00151 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDLIM1O00151 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM1O00151 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM1O00151 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM1O00151 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM1O00151 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM1O00151 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM1O00151 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.16■□□□□ 0.98
PDLIM1O00151 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM1O00151 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PDLIM1O00151 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM1O00151 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms