Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM223BA6NKX1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 AC241377.3-202ENST00000626088 1088 ntBASIC17.41■□□□□ 0.38
FAM223BA6NKX1 AC241585.3-202ENST00000628937 1088 ntBASIC17.41■□□□□ 0.38
FAM223BA6NKX1 AC245100.8-202ENST00000629247 1058 ntBASIC17.41■□□□□ 0.38
FAM223BA6NKX1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM223BA6NKX1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 DUX4L4-201ENST00000566884 1269 ntBASIC17.4■□□□□ 0.38
FAM223BA6NKX1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 AL353803.4-201ENST00000565882 1934 ntBASIC17.4■□□□□ 0.38
FAM223BA6NKX1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM223BA6NKX1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
FAM223BA6NKX1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
FAM223BA6NKX1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FAM223BA6NKX1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 SRD5A1P1-201ENST00000442297 786 ntBASIC17.39■□□□□ 0.37
FAM223BA6NKX1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.39■□□□□ 0.37
FAM223BA6NKX1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 AC092171.4-201ENST00000609130 632 ntBASIC17.38■□□□□ 0.37
FAM223BA6NKX1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FAM223BA6NKX1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 AC009086.3-201ENST00000623486 1008 ntBASIC17.37■□□□□ 0.37
FAM223BA6NKX1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
FAM223BA6NKX1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms