Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 AL117328.2-201ENST00000624617 1940 ntBASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM49BA6NDI0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 AC079834.2-201ENST00000609776 1949 ntBASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 EP400NL-214ENST00000641289 2402 ntBASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
TRIM49BA6NDI0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM49BA6NDI0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TRIM49BA6NDI0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
TRIM49BA6NDI0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM49BA6NDI0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.7■■□□□ 1.54
TRIM49BA6NDI0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.7■■□□□ 1.54
TRIM49BA6NDI0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM49BA6NDI0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.7■■□□□ 1.54
TRIM49BA6NDI0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.7■■□□□ 1.54
TRIM49BA6NDI0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM49BA6NDI0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM49BA6NDI0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.69■■□□□ 1.54
TRIM49BA6NDI0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM49BA6NDI0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TRIM49BA6NDI0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM49BA6NDI0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 MIR6722-201ENST00000617286 78 ntBASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM49BA6NDI0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM49BA6NDI0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM49BA6NDI0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM49BA6NDI0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.66■■□□□ 1.54
TRIM49BA6NDI0 AC092028.1-203ENST00000608262 953 ntBASIC24.66■■□□□ 1.54
TRIM49BA6NDI0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM49BA6NDI0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.66■■□□□ 1.54
TRIM49BA6NDI0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM49BA6NDI0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM49BA6NDI0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.65■■□□□ 1.54
TRIM49BA6NDI0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM49BA6NDI0 AL451085.2-201ENST00000605085 799 ntBASIC24.65■■□□□ 1.54
TRIM49BA6NDI0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM49BA6NDI0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM49BA6NDI0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.64■■□□□ 1.54
TRIM49BA6NDI0 AC144652.1-201ENST00000609974 1624 ntBASIC24.64■■□□□ 1.54
TRIM49BA6NDI0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.64■■□□□ 1.54
TRIM49BA6NDI0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.64■■□□□ 1.54
TRIM49BA6NDI0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM49BA6NDI0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
TRIM49BA6NDI0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.64■■□□□ 1.54
TRIM49BA6NDI0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.64■■□□□ 1.54
TRIM49BA6NDI0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
TRIM49BA6NDI0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
TRIM49BA6NDI0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.64■■□□□ 1.53
TRIM49BA6NDI0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM49BA6NDI0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM49BA6NDI0 AC005703.6-201ENST00000623265 1329 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms