Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
SH3D21A4FU49 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.72■□□□□ 0.91
SH3D21A4FU49 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3D21A4FU49 GUSBP5-202ENST00000510805 1989 ntBASIC20.72■□□□□ 0.91
SH3D21A4FU49 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3D21A4FU49 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3D21A4FU49 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3D21A4FU49 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.72■□□□□ 0.91
SH3D21A4FU49 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.72■□□□□ 0.91
SH3D21A4FU49 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
SH3D21A4FU49 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.72■□□□□ 0.91
SH3D21A4FU49 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3D21A4FU49 AC137767.1-201ENST00000602918 1920 ntBASIC20.72■□□□□ 0.91
SH3D21A4FU49 ECEL1P1-201ENST00000373592 1742 ntBASIC20.72■□□□□ 0.91
SH3D21A4FU49 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3D21A4FU49 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3D21A4FU49 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SH3D21A4FU49 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3D21A4FU49 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3D21A4FU49 MIR4281-201ENST00000580852 62 ntBASIC20.71■□□□□ 0.91
SH3D21A4FU49 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3D21A4FU49 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SH3D21A4FU49 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
SH3D21A4FU49 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
SH3D21A4FU49 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.91
SH3D21A4FU49 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3D21A4FU49 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.7■□□□□ 0.9
SH3D21A4FU49 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.7■□□□□ 0.9
SH3D21A4FU49 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH3D21A4FU49 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3D21A4FU49 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3D21A4FU49 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3D21A4FU49 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH3D21A4FU49 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
SH3D21A4FU49 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3D21A4FU49 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3D21A4FU49 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.69■□□□□ 0.9
SH3D21A4FU49 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3D21A4FU49 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SH3D21A4FU49 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3D21A4FU49 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3D21A4FU49 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3D21A4FU49 AL161729.1-201ENST00000604104 1402 ntBASIC20.69■□□□□ 0.9
SH3D21A4FU49 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3D21A4FU49 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3D21A4FU49 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.68■□□□□ 0.9
SH3D21A4FU49 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.68■□□□□ 0.9
SH3D21A4FU49 AC092028.1-203ENST00000608262 953 ntBASIC20.68■□□□□ 0.9
SH3D21A4FU49 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3D21A4FU49 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3D21A4FU49 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.68■□□□□ 0.9
SH3D21A4FU49 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3D21A4FU49 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3D21A4FU49 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3D21A4FU49 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3D21A4FU49 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3D21A4FU49 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3D21A4FU49 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SH3D21A4FU49 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.67■□□□□ 0.9
SH3D21A4FU49 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SH3D21A4FU49 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3D21A4FU49 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3D21A4FU49 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3D21A4FU49 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.66■□□□□ 0.9
SH3D21A4FU49 AC011551.1-201ENST00000614101 683 ntBASIC20.66■□□□□ 0.9
SH3D21A4FU49 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.66■□□□□ 0.9
SH3D21A4FU49 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
SH3D21A4FU49 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.66■□□□□ 0.9
SH3D21A4FU49 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH3D21A4FU49 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.66■□□□□ 0.9
SH3D21A4FU49 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3D21A4FU49 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH3D21A4FU49 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.65■□□□□ 0.9
SH3D21A4FU49 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
SH3D21A4FU49 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.65■□□□□ 0.9
SH3D21A4FU49 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3D21A4FU49 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH3D21A4FU49 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.65■□□□□ 0.9
SH3D21A4FU49 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SH3D21A4FU49 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.65■□□□□ 0.9
SH3D21A4FU49 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH3D21A4FU49 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH3D21A4FU49 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms