Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 AL353803.4-201ENST00000565882 1934 ntBASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC196A0A1B0GTZ2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC196A0A1B0GTZ2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.05■■□□□ 1.76
CCDC196A0A1B0GTZ2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
CCDC196A0A1B0GTZ2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.04■■□□□ 1.76
CCDC196A0A1B0GTZ2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.04■■□□□ 1.76
CCDC196A0A1B0GTZ2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC196A0A1B0GTZ2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC196A0A1B0GTZ2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC196A0A1B0GTZ2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC196A0A1B0GTZ2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC196A0A1B0GTZ2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 DUX4L4-201ENST00000566884 1269 ntBASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 AL512631.2-201ENST00000604634 923 ntBASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 AC241377.3-202ENST00000626088 1088 ntBASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 AC241585.3-202ENST00000628937 1088 ntBASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 AC245100.8-202ENST00000629247 1058 ntBASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC196A0A1B0GTZ2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC196A0A1B0GTZ2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC196A0A1B0GTZ2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
CCDC196A0A1B0GTZ2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 SRD5A1P1-201ENST00000442297 786 ntBASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 AC131212.1-201ENST00000613771 668 ntBASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms