Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 AC011551.1-201ENST00000614101 683 ntBASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-20A0A0C4DH25 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV3D-20A0A0C4DH25 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-20A0A0C4DH25 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV3D-20A0A0C4DH25 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.59■□□□□ 0.25
IGKV3D-20A0A0C4DH25 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV3D-20A0A0C4DH25 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV3D-20A0A0C4DH25 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
IGKV3D-20A0A0C4DH25 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.58■□□□□ 0.25
IGKV3D-20A0A0C4DH25 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.58■□□□□ 0.25
IGKV3D-20A0A0C4DH25 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
IGKV3D-20A0A0C4DH25 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 ESRRAP2-201ENST00000418437 1549 ntBASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 AC242852.2-201ENST00000615738 1807 ntBASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
IGKV3D-20A0A0C4DH25 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-20A0A0C4DH25 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-20A0A0C4DH25 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-20A0A0C4DH25 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-20A0A0C4DH25 AC137767.1-201ENST00000602918 1920 ntBASIC16.57■□□□□ 0.24
IGKV3D-20A0A0C4DH25 AC079630.1-202ENST00000618127 1840 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms