Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHAC1Q9H158 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHAC1Q9H158 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHAC1Q9H158 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHAC1Q9H158 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHAC1Q9H158 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHAC1Q9H158 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHAC1Q9H158 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
PCDHAC1Q9H158 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHAC1Q9H158 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHAC1Q9H158 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHAC1Q9H158 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.49■■□□□ 1.83
PCDHAC1Q9H158 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHAC1Q9H158 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHAC1Q9H158 ABCB10P1-201ENST00000614297 2181 ntBASIC26.47■■□□□ 1.83
PCDHAC1Q9H158 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHAC1Q9H158 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.45■■□□□ 1.83
PCDHAC1Q9H158 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHAC1Q9H158 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHAC1Q9H158 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHAC1Q9H158 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHAC1Q9H158 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
PCDHAC1Q9H158 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.39■■□□□ 1.81
PCDHAC1Q9H158 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHAC1Q9H158 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHAC1Q9H158 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHAC1Q9H158 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHAC1Q9H158 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHAC1Q9H158 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHAC1Q9H158 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.31■■□□□ 1.8
PCDHAC1Q9H158 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHAC1Q9H158 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHAC1Q9H158 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHAC1Q9H158 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHAC1Q9H158 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.28■■□□□ 1.8
PCDHAC1Q9H158 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHAC1Q9H158 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PCDHAC1Q9H158 ABCB10P3-201ENST00000561950 2166 ntBASIC26.26■■□□□ 1.79
PCDHAC1Q9H158 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHAC1Q9H158 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHAC1Q9H158 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHAC1Q9H158 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHAC1Q9H158 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PCDHAC1Q9H158 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHAC1Q9H158 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHAC1Q9H158 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHAC1Q9H158 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC1Q9H158 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHAC1Q9H158 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHAC1Q9H158 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHAC1Q9H158 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHAC1Q9H158 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHAC1Q9H158 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.2■■□□□ 1.78
PCDHAC1Q9H158 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHAC1Q9H158 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
PCDHAC1Q9H158 AC120057.4-201ENST00000624722 1615 ntBASIC26.19■■□□□ 1.78
PCDHAC1Q9H158 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHAC1Q9H158 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHAC1Q9H158 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHAC1Q9H158 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PCDHAC1Q9H158 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHAC1Q9H158 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHAC1Q9H158 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHAC1Q9H158 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHAC1Q9H158 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHAC1Q9H158 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHAC1Q9H158 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHAC1Q9H158 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHAC1Q9H158 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHAC1Q9H158 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHAC1Q9H158 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHAC1Q9H158 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
PCDHAC1Q9H158 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHAC1Q9H158 AC139426.1-201ENST00000568218 2529 ntBASIC26.08■■□□□ 1.77
PCDHAC1Q9H158 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHAC1Q9H158 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHAC1Q9H158 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHAC1Q9H158 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
PCDHAC1Q9H158 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHAC1Q9H158 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
PCDHAC1Q9H158 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.01■■□□□ 1.75
PCDHAC1Q9H158 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHAC1Q9H158 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHAC1Q9H158 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHAC1Q9H158 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PCDHAC1Q9H158 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.94■■□□□ 1.74
PCDHAC1Q9H158 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHAC1Q9H158 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHAC1Q9H158 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
PCDHAC1Q9H158 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
PCDHAC1Q9H158 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHAC1Q9H158 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHAC1Q9H158 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PCDHAC1Q9H158 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHAC1Q9H158 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHAC1Q9H158 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHAC1Q9H158 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHAC1Q9H158 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDHAC1Q9H158 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHAC1Q9H158 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms