Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
DDX47Q9H0S4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
DDX47Q9H0S4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
DDX47Q9H0S4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
DDX47Q9H0S4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
DDX47Q9H0S4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
DDX47Q9H0S4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.03■■■□□ 2.24
DDX47Q9H0S4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
DDX47Q9H0S4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.02■■■□□ 2.24
DDX47Q9H0S4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
DDX47Q9H0S4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
DDX47Q9H0S4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.96■■■□□ 2.23
DDX47Q9H0S4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
DDX47Q9H0S4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
DDX47Q9H0S4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.94■■■□□ 2.22
DDX47Q9H0S4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.93■■■□□ 2.22
DDX47Q9H0S4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
DDX47Q9H0S4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.92■■■□□ 2.22
DDX47Q9H0S4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DDX47Q9H0S4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DDX47Q9H0S4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.89■■■□□ 2.22
DDX47Q9H0S4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
DDX47Q9H0S4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
DDX47Q9H0S4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.86■■■□□ 2.21
DDX47Q9H0S4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
DDX47Q9H0S4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
DDX47Q9H0S4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
DDX47Q9H0S4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
DDX47Q9H0S4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
DDX47Q9H0S4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
DDX47Q9H0S4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
DDX47Q9H0S4 AC120057.4-201ENST00000624722 1615 ntBASIC28.81■■■□□ 2.2
DDX47Q9H0S4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
DDX47Q9H0S4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
DDX47Q9H0S4 ABCB10P1-201ENST00000614297 2181 ntBASIC28.79■■■□□ 2.2
DDX47Q9H0S4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
DDX47Q9H0S4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
DDX47Q9H0S4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.78■■■□□ 2.2
DDX47Q9H0S4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
DDX47Q9H0S4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.76■■■□□ 2.19
DDX47Q9H0S4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
DDX47Q9H0S4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.73■■■□□ 2.19
DDX47Q9H0S4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.73■■■□□ 2.19
DDX47Q9H0S4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DDX47Q9H0S4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.72■■■□□ 2.19
DDX47Q9H0S4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
DDX47Q9H0S4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
DDX47Q9H0S4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
DDX47Q9H0S4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
DDX47Q9H0S4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
DDX47Q9H0S4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
DDX47Q9H0S4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX47Q9H0S4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
DDX47Q9H0S4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
DDX47Q9H0S4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
DDX47Q9H0S4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
DDX47Q9H0S4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.64■■■□□ 2.18
DDX47Q9H0S4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
DDX47Q9H0S4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
DDX47Q9H0S4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.6■■■□□ 2.17
DDX47Q9H0S4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.6■■■□□ 2.17
DDX47Q9H0S4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.6■■■□□ 2.17
DDX47Q9H0S4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
DDX47Q9H0S4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
DDX47Q9H0S4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
DDX47Q9H0S4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
DDX47Q9H0S4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.55■■■□□ 2.16
DDX47Q9H0S4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
DDX47Q9H0S4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
DDX47Q9H0S4 ABCB10P3-201ENST00000561950 2166 ntBASIC28.52■■■□□ 2.16
DDX47Q9H0S4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
DDX47Q9H0S4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.52■■■□□ 2.16
DDX47Q9H0S4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
DDX47Q9H0S4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
DDX47Q9H0S4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
DDX47Q9H0S4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
DDX47Q9H0S4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
DDX47Q9H0S4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.5■■■□□ 2.15
DDX47Q9H0S4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.49■■■□□ 2.15
DDX47Q9H0S4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
DDX47Q9H0S4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
DDX47Q9H0S4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
DDX47Q9H0S4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
DDX47Q9H0S4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
DDX47Q9H0S4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
DDX47Q9H0S4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
DDX47Q9H0S4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
DDX47Q9H0S4 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.38■■■□□ 2.13
DDX47Q9H0S4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
DDX47Q9H0S4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
DDX47Q9H0S4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
DDX47Q9H0S4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.37■■■□□ 2.13
DDX47Q9H0S4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.37■■■□□ 2.13
DDX47Q9H0S4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.37■■■□□ 2.13
DDX47Q9H0S4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
DDX47Q9H0S4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
DDX47Q9H0S4 AC006077.2-201ENST00000623591 457 ntBASIC28.35■■■□□ 2.13
DDX47Q9H0S4 AC139426.1-201ENST00000568218 2529 ntBASIC28.35■■■□□ 2.13
DDX47Q9H0S4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
DDX47Q9H0S4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms