Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCGB3A1Q96QR1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.9■□□□□ 0.78
SCGB3A1Q96QR1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.9■□□□□ 0.78
SCGB3A1Q96QR1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCGB3A1Q96QR1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SCGB3A1Q96QR1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCGB3A1Q96QR1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCGB3A1Q96QR1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SCGB3A1Q96QR1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCGB3A1Q96QR1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCGB3A1Q96QR1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCGB3A1Q96QR1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCGB3A1Q96QR1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCGB3A1Q96QR1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCGB3A1Q96QR1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCGB3A1Q96QR1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SCGB3A1Q96QR1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.8■□□□□ 0.76
SCGB3A1Q96QR1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.8■□□□□ 0.76
SCGB3A1Q96QR1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCGB3A1Q96QR1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCGB3A1Q96QR1 ABCB10P1-201ENST00000614297 2181 ntBASIC19.76■□□□□ 0.75
SCGB3A1Q96QR1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCGB3A1Q96QR1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCGB3A1Q96QR1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCGB3A1Q96QR1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.75■□□□□ 0.75
SCGB3A1Q96QR1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCGB3A1Q96QR1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCGB3A1Q96QR1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCGB3A1Q96QR1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCGB3A1Q96QR1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCGB3A1Q96QR1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCGB3A1Q96QR1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCGB3A1Q96QR1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCGB3A1Q96QR1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCGB3A1Q96QR1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCGB3A1Q96QR1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.69■□□□□ 0.74
SCGB3A1Q96QR1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCGB3A1Q96QR1 ABCB10P3-201ENST00000561950 2166 ntBASIC19.69■□□□□ 0.74
SCGB3A1Q96QR1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCGB3A1Q96QR1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCGB3A1Q96QR1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCGB3A1Q96QR1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCGB3A1Q96QR1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.68■□□□□ 0.74
SCGB3A1Q96QR1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCGB3A1Q96QR1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCGB3A1Q96QR1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCGB3A1Q96QR1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.65■□□□□ 0.74
SCGB3A1Q96QR1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.65■□□□□ 0.74
SCGB3A1Q96QR1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCGB3A1Q96QR1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCGB3A1Q96QR1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCGB3A1Q96QR1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCGB3A1Q96QR1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCGB3A1Q96QR1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SCGB3A1Q96QR1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCGB3A1Q96QR1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCGB3A1Q96QR1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SCGB3A1Q96QR1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCGB3A1Q96QR1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCGB3A1Q96QR1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SCGB3A1Q96QR1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCGB3A1Q96QR1 AL161658.1-201ENST00000623641 1967 ntBASIC19.61■□□□□ 0.73
SCGB3A1Q96QR1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCGB3A1Q96QR1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCGB3A1Q96QR1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.6■□□□□ 0.73
SCGB3A1Q96QR1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SCGB3A1Q96QR1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SCGB3A1Q96QR1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB3A1Q96QR1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB3A1Q96QR1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCGB3A1Q96QR1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCGB3A1Q96QR1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCGB3A1Q96QR1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCGB3A1Q96QR1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCGB3A1Q96QR1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SCGB3A1Q96QR1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCGB3A1Q96QR1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.51■□□□□ 0.71
SCGB3A1Q96QR1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCGB3A1Q96QR1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCGB3A1Q96QR1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.49■□□□□ 0.71
SCGB3A1Q96QR1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCGB3A1Q96QR1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCGB3A1Q96QR1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.48■□□□□ 0.71
SCGB3A1Q96QR1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCGB3A1Q96QR1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCGB3A1Q96QR1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.46■□□□□ 0.71
SCGB3A1Q96QR1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCGB3A1Q96QR1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCGB3A1Q96QR1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCGB3A1Q96QR1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCGB3A1Q96QR1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCGB3A1Q96QR1 AC120057.4-201ENST00000624722 1615 ntBASIC19.43■□□□□ 0.7
SCGB3A1Q96QR1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
SCGB3A1Q96QR1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCGB3A1Q96QR1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCGB3A1Q96QR1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCGB3A1Q96QR1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCGB3A1Q96QR1 AC139426.1-201ENST00000568218 2529 ntBASIC19.42■□□□□ 0.7
SCGB3A1Q96QR1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCGB3A1Q96QR1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms