Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD6Q8TD26 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CHD6Q8TD26 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CHD6Q8TD26 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD6Q8TD26 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.8■■□□□ 1.88
CHD6Q8TD26 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
CHD6Q8TD26 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CHD6Q8TD26 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD6Q8TD26 AC044849.2-201ENST00000606596 710 ntBASIC26.77■■□□□ 1.88
CHD6Q8TD26 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHD6Q8TD26 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.76■■□□□ 1.87
CHD6Q8TD26 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHD6Q8TD26 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHD6Q8TD26 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CHD6Q8TD26 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.73■■□□□ 1.87
CHD6Q8TD26 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.73■■□□□ 1.87
CHD6Q8TD26 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CHD6Q8TD26 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHD6Q8TD26 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.7■■□□□ 1.86
CHD6Q8TD26 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.69■■□□□ 1.86
CHD6Q8TD26 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHD6Q8TD26 DUX4L28-201ENST00000623687 678 ntBASIC26.68■■□□□ 1.86
CHD6Q8TD26 MIR639-201ENST00000384974 98 ntBASIC26.68■■□□□ 1.86
CHD6Q8TD26 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.67■■□□□ 1.86
CHD6Q8TD26 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD6Q8TD26 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD6Q8TD26 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.65■■□□□ 1.86
CHD6Q8TD26 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHD6Q8TD26 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.64■■□□□ 1.85
CHD6Q8TD26 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.63■■□□□ 1.85
CHD6Q8TD26 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.61■■□□□ 1.85
CHD6Q8TD26 ZNRF2P2-203ENST00000454624 420 ntBASIC26.59■■□□□ 1.85
CHD6Q8TD26 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CHD6Q8TD26 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.59■■□□□ 1.85
CHD6Q8TD26 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
CHD6Q8TD26 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.55■■□□□ 1.84
CHD6Q8TD26 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD6Q8TD26 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD6Q8TD26 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CHD6Q8TD26 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.5■■□□□ 1.83
CHD6Q8TD26 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD6Q8TD26 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD6Q8TD26 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.43■■□□□ 1.82
CHD6Q8TD26 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CHD6Q8TD26 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.42■■□□□ 1.82
CHD6Q8TD26 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD6Q8TD26 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD6Q8TD26 MIR762-201ENST00000390236 83 ntBASIC26.4■■□□□ 1.82
CHD6Q8TD26 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CHD6Q8TD26 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD6Q8TD26 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD6Q8TD26 AC005559.1-201ENST00000589661 871 ntBASIC26.4■■□□□ 1.82
CHD6Q8TD26 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHD6Q8TD26 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD6Q8TD26 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.37■■□□□ 1.81
CHD6Q8TD26 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC26.36■■□□□ 1.81
CHD6Q8TD26 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.33■■□□□ 1.81
CHD6Q8TD26 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHD6Q8TD26 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD6Q8TD26 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.29■■□□□ 1.8
CHD6Q8TD26 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD6Q8TD26 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CHD6Q8TD26 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.27■■□□□ 1.8
CHD6Q8TD26 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.26■■□□□ 1.79
CHD6Q8TD26 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.25■■□□□ 1.79
CHD6Q8TD26 MIR3648-2-201ENST00000581792 180 ntBASIC26.25■■□□□ 1.79
CHD6Q8TD26 MIR3648-1-201ENST00000615959 180 ntBASIC26.25■■□□□ 1.79
CHD6Q8TD26 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.23■■□□□ 1.79
CHD6Q8TD26 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD6Q8TD26 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHD6Q8TD26 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHD6Q8TD26 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.2■■□□□ 1.78
CHD6Q8TD26 AL133380.1-201ENST00000506013 324 ntBASIC26.19■■□□□ 1.78
CHD6Q8TD26 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHD6Q8TD26 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD6Q8TD26 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHD6Q8TD26 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD6Q8TD26 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD6Q8TD26 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD6Q8TD26 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD6Q8TD26 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CHD6Q8TD26 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CHD6Q8TD26 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.14■■□□□ 1.78
CHD6Q8TD26 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD6Q8TD26 AC016575.1-201ENST00000607026 382 ntBASIC26.13■■□□□ 1.77
CHD6Q8TD26 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CHD6Q8TD26 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
CHD6Q8TD26 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD6Q8TD26 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.1■■□□□ 1.77
CHD6Q8TD26 AC019069.1-201ENST00000610008 1333 ntBASIC26.09■■□□□ 1.77
CHD6Q8TD26 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.06■■□□□ 1.76
CHD6Q8TD26 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
CHD6Q8TD26 RARRES2P2-201ENST00000394842 485 ntBASIC26.05■■□□□ 1.76
CHD6Q8TD26 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CHD6Q8TD26 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CHD6Q8TD26 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHD6Q8TD26 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.02■■□□□ 1.76
CHD6Q8TD26 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26■■□□□ 1.75
CHD6Q8TD26 CR559946.2-201ENST00000623684 991 ntBASIC26■■□□□ 1.75
CHD6Q8TD26 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms