Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
DHX40Q8IX18 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
DHX40Q8IX18 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
DHX40Q8IX18 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DHX40Q8IX18 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DHX40Q8IX18 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DHX40Q8IX18 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DHX40Q8IX18 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DHX40Q8IX18 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.12■■■□□ 2.57
DHX40Q8IX18 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.1■■■□□ 2.57
DHX40Q8IX18 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
DHX40Q8IX18 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
DHX40Q8IX18 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.02■■■□□ 2.56
DHX40Q8IX18 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
DHX40Q8IX18 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.01■■■□□ 2.55
DHX40Q8IX18 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31■■■□□ 2.55
DHX40Q8IX18 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.98■■■□□ 2.55
DHX40Q8IX18 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
DHX40Q8IX18 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.95■■■□□ 2.55
DHX40Q8IX18 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DHX40Q8IX18 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
DHX40Q8IX18 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.94■■■□□ 2.54
DHX40Q8IX18 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
DHX40Q8IX18 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
DHX40Q8IX18 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
DHX40Q8IX18 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
DHX40Q8IX18 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
DHX40Q8IX18 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
DHX40Q8IX18 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
DHX40Q8IX18 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
DHX40Q8IX18 AC120057.4-201ENST00000624722 1615 ntBASIC30.88■■■□□ 2.53
DHX40Q8IX18 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
DHX40Q8IX18 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
DHX40Q8IX18 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
DHX40Q8IX18 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
DHX40Q8IX18 ABCB10P1-201ENST00000614297 2181 ntBASIC30.85■■■□□ 2.53
DHX40Q8IX18 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
DHX40Q8IX18 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.85■■■□□ 2.53
DHX40Q8IX18 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.85■■■□□ 2.53
DHX40Q8IX18 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
DHX40Q8IX18 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
DHX40Q8IX18 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
DHX40Q8IX18 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
DHX40Q8IX18 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
DHX40Q8IX18 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.79■■■□□ 2.52
DHX40Q8IX18 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.77■■■□□ 2.52
DHX40Q8IX18 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
DHX40Q8IX18 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.76■■■□□ 2.51
DHX40Q8IX18 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
DHX40Q8IX18 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
DHX40Q8IX18 AC006077.2-201ENST00000623591 457 ntBASIC30.74■■■□□ 2.51
DHX40Q8IX18 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
DHX40Q8IX18 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
DHX40Q8IX18 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.72■■■□□ 2.51
DHX40Q8IX18 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
DHX40Q8IX18 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
DHX40Q8IX18 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
DHX40Q8IX18 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
DHX40Q8IX18 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.7■■■□□ 2.51
DHX40Q8IX18 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
DHX40Q8IX18 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
DHX40Q8IX18 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.68■■■□□ 2.5
DHX40Q8IX18 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
DHX40Q8IX18 ZNRF2P1-201ENST00000441407 443 ntBASIC30.67■■■□□ 2.5
DHX40Q8IX18 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
DHX40Q8IX18 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.63■■■□□ 2.49
DHX40Q8IX18 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
DHX40Q8IX18 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DHX40Q8IX18 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.61■■■□□ 2.49
DHX40Q8IX18 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
DHX40Q8IX18 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
DHX40Q8IX18 ABCB10P3-201ENST00000561950 2166 ntBASIC30.58■■■□□ 2.49
DHX40Q8IX18 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.58■■■□□ 2.49
DHX40Q8IX18 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
DHX40Q8IX18 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
DHX40Q8IX18 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.57■■■□□ 2.48
DHX40Q8IX18 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
DHX40Q8IX18 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.55■■■□□ 2.48
DHX40Q8IX18 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
DHX40Q8IX18 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
DHX40Q8IX18 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
DHX40Q8IX18 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
DHX40Q8IX18 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
DHX40Q8IX18 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
DHX40Q8IX18 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
DHX40Q8IX18 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
DHX40Q8IX18 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DHX40Q8IX18 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
DHX40Q8IX18 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
DHX40Q8IX18 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
DHX40Q8IX18 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
DHX40Q8IX18 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
DHX40Q8IX18 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
DHX40Q8IX18 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
DHX40Q8IX18 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.43■■■□□ 2.46
DHX40Q8IX18 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
DHX40Q8IX18 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
DHX40Q8IX18 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.4■■■□□ 2.46
DHX40Q8IX18 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
DHX40Q8IX18 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms